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A

a - Variable in class org.dllearner.kb.extraction.PropertyNode
 
a - Variable in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
a - Variable in class org.dllearner.utilities.datastructures.StringTuple
 
ABoxAxiomTypes - Static variable in class org.dllearner.algorithms.properties.AxiomAlgorithms
set of abox axiom types
ABoxConcept() - Method in class org.dllearner.parser.KBParser
 
ABoxQueryGenerator - Class in org.dllearner.kb.sparql.simple
 
ABoxQueryGenerator() - Constructor for class org.dllearner.kb.sparql.simple.ABoxQueryGenerator
 
ABoxRole() - Method in class org.dllearner.parser.KBParser
 
AbstractAxiomLearningAlgorithm<T extends org.semanticweb.owlapi.model.OWLAxiom,S extends org.semanticweb.owlapi.model.OWLObject,E extends org.semanticweb.owlapi.model.OWLEntity> - Class in org.dllearner.core
 
AbstractAxiomLearningAlgorithm() - Constructor for class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
AbstractAxiomScoreCalculator - Class in org.dllearner.core
 
AbstractAxiomScoreCalculator(QueryExecutionFactory) - Constructor for class org.dllearner.core.AbstractAxiomScoreCalculator
 
AbstractCELA - Class in org.dllearner.core
Abstract superclass of all class expression learning algorithm implementations.
AbstractCELA() - Constructor for class org.dllearner.core.AbstractCELA
Default Constructor
AbstractCELA(AbstractClassExpressionLearningProblem, AbstractReasonerComponent) - Constructor for class org.dllearner.core.AbstractCELA
Each learning algorithm gets a learning problem and a reasoner as input.
AbstractClassExpressionLearningProblem<T extends Score> - Class in org.dllearner.core
Base class for all class expression learning problems.
AbstractClassExpressionLearningProblem() - Constructor for class org.dllearner.core.AbstractClassExpressionLearningProblem
 
AbstractClassExpressionLearningProblem(AbstractReasonerComponent) - Constructor for class org.dllearner.core.AbstractClassExpressionLearningProblem
Constructs a learning problem using a reasoning service for querying the background knowledge.
AbstractComponent - Class in org.dllearner.core
Base class of all components.
AbstractComponent() - Constructor for class org.dllearner.core.AbstractComponent
 
AbstractDateTimeValuesSplitter - Class in org.dllearner.utilities.split
 
AbstractDateTimeValuesSplitter(AbstractReasonerComponent, OWLDataFactory) - Constructor for class org.dllearner.utilities.split.AbstractDateTimeValuesSplitter
 
AbstractHeuristic - Class in org.dllearner.core
Search algorithm heuristic for the ontology engineering algorithm.
AbstractHeuristic() - Constructor for class org.dllearner.core.AbstractHeuristic
 
AbstractHierarchy<T extends org.semanticweb.owlapi.model.OWLObject> - Class in org.dllearner.core.owl
 
AbstractHierarchy(SortedMap<T, SortedSet<T>>, SortedMap<T, SortedSet<T>>) - Constructor for class org.dllearner.core.owl.AbstractHierarchy
 
AbstractKnowledgeSource - Class in org.dllearner.core
Represents a knowledge source component, e.g.
AbstractKnowledgeSource() - Constructor for class org.dllearner.core.AbstractKnowledgeSource
 
AbstractLearningProblem<T extends Score,V extends org.semanticweb.owlapi.model.OWLObject,W extends EvaluatedHypothesis<V,T>> - Class in org.dllearner.core
Base class for all learning problems.
AbstractLearningProblem() - Constructor for class org.dllearner.core.AbstractLearningProblem
 
AbstractLearningProblem(AbstractReasonerComponent) - Constructor for class org.dllearner.core.AbstractLearningProblem
Constructs a learning problem using a reasoning service for querying the background knowledge.
AbstractLGGGenerator - Class in org.dllearner.algorithms.qtl.operations.lgg
An LGG generator that can be stopped and given a timeout.
AbstractLGGGenerator() - Constructor for class org.dllearner.algorithms.qtl.operations.lgg.AbstractLGGGenerator
 
AbstractModel - Class in org.dllearner.algorithms.decisiontrees.tdt.model
 
AbstractModel() - Constructor for class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractModel
 
AbstractNumericValuesSplitter - Class in org.dllearner.utilities.split
 
AbstractNumericValuesSplitter(AbstractReasonerComponent, OWLDataFactory) - Constructor for class org.dllearner.utilities.split.AbstractNumericValuesSplitter
 
AbstractOWLOntologyDataset - Class in org.dllearner.kb.dataset
 
AbstractOWLOntologyDataset(File, String, boolean) - Constructor for class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
AbstractOWLOntologyDataset(File, String) - Constructor for class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
AbstractReasonerComponent - Class in org.dllearner.core
Abstract component representing a reasoner.
AbstractReasonerComponent() - Constructor for class org.dllearner.core.AbstractReasonerComponent
 
AbstractReasonerComponent(Set<KnowledgeSource>) - Constructor for class org.dllearner.core.AbstractReasonerComponent
Constructs a new reasoner component.
AbstractReasonerComponent(KnowledgeSource) - Constructor for class org.dllearner.core.AbstractReasonerComponent
 
AbstractRenderer - Class in org.dllearner.algorithms.pattern
Author: Matthew Horridge
The University Of Manchester
Bio-Health Informatics Group
Date: 25-Apr-2007

AbstractRenderer(Writer, ShortFormProvider) - Constructor for class org.dllearner.algorithms.pattern.AbstractRenderer
 
AbstractSampleGenerator - Class in org.dllearner.kb.sparql
 
AbstractSampleGenerator(SparqlEndpointKS) - Constructor for class org.dllearner.kb.sparql.AbstractSampleGenerator
 
AbstractSampleGenerator(QueryExecutionFactory) - Constructor for class org.dllearner.kb.sparql.AbstractSampleGenerator
 
AbstractSchemaGenerator - Class in org.dllearner.algorithms.schema
 
AbstractSchemaGenerator(QueryExecutionFactory) - Constructor for class org.dllearner.algorithms.schema.AbstractSchemaGenerator
 
AbstractSchemaGenerator(Model) - Constructor for class org.dllearner.algorithms.schema.AbstractSchemaGenerator
 
AbstractSearchTree<T extends AbstractSearchTreeNode> - Class in org.dllearner.utilities.datastructures
 
AbstractSearchTree(Comparator<T>) - Constructor for class org.dllearner.utilities.datastructures.AbstractSearchTree
create a new search tree
AbstractSearchTreeNode<T extends AbstractSearchTreeNode> - Class in org.dllearner.core
 
AbstractSearchTreeNode() - Constructor for class org.dllearner.core.AbstractSearchTreeNode
 
AbstractTDTClassifier - Class in org.dllearner.algorithms.decisiontrees.tdt
 
AbstractTDTClassifier(AbstractClassExpressionLearningProblem, AbstractReasonerComponent, RefinementOperator) - Constructor for class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
AbstractTDTClassifier() - Constructor for class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
AbstractTree - Class in org.dllearner.algorithms.decisiontrees.tdt.model
Abstract class for induced Tree model
AbstractTree() - Constructor for class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
AbstractValuesSplitter - Class in org.dllearner.utilities.split
Abstract class for values splitting implementation.
AbstractValuesSplitter(AbstractReasonerComponent, OWLDataFactory) - Constructor for class org.dllearner.utilities.split.AbstractValuesSplitter
 
AbstractValuesSplitter(AbstractReasonerComponent, OWLDataFactory, int) - Constructor for class org.dllearner.utilities.split.AbstractValuesSplitter
 
accept(Statement) - Method in class org.dllearner.algorithms.qtl.filters.KeywordBasedStatementFilter
 
accept(Statement) - Method in class org.dllearner.algorithms.qtl.filters.KeywordBasedStatementFilter2
 
accept(Statement) - Method in class org.dllearner.algorithms.qtl.util.filters.NamespaceDropStatementFilter
 
accept(Statement) - Method in class org.dllearner.algorithms.qtl.util.filters.ObjectDropStatementFilter
 
accept(Statement) - Method in class org.dllearner.algorithms.qtl.util.filters.PredicateDropStatementFilter
 
accept(OWLClassExpressionVisitor) - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
accept(OWLObjectVisitor) - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
accept(OWLObjectVisitorEx<O>) - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
accept(OWLClassExpressionVisitorEx<O>) - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
accept(OWLClassExpressionVisitor) - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
accept(OWLObjectVisitor) - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
accept(OWLClassExpressionVisitorEx<O>) - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
accept(OWLObjectVisitorEx<O>) - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
AccMethod - Interface in org.dllearner.learningproblems
Interface for any accuracy method
AccMethodAMeasure - Class in org.dllearner.learningproblems
 
AccMethodAMeasure() - Constructor for class org.dllearner.learningproblems.AccMethodAMeasure
 
AccMethodAMeasure(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodAMeasure
 
AccMethodAMeasureApprox - Class in org.dllearner.learningproblems
 
AccMethodAMeasureApprox() - Constructor for class org.dllearner.learningproblems.AccMethodAMeasureApprox
 
AccMethodApproximate - Interface in org.dllearner.learningproblems
Implementation of approximate accuracy calculation.
AccMethodFMeasure - Class in org.dllearner.learningproblems
 
AccMethodFMeasure() - Constructor for class org.dllearner.learningproblems.AccMethodFMeasure
 
AccMethodFMeasure(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodFMeasure
 
AccMethodFMeasureApprox - Class in org.dllearner.learningproblems
 
AccMethodFMeasureApprox(boolean, AbstractReasonerComponent) - Constructor for class org.dllearner.learningproblems.AccMethodFMeasureApprox
 
AccMethodFMeasureApprox() - Constructor for class org.dllearner.learningproblems.AccMethodFMeasureApprox
 
AccMethodFMeasureWeighted - Class in org.dllearner.learningproblems
 
AccMethodFMeasureWeighted() - Constructor for class org.dllearner.learningproblems.AccMethodFMeasureWeighted
 
AccMethodFMeasureWeighted(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodFMeasureWeighted
 
AccMethodGenFMeasure - Class in org.dllearner.learningproblems
 
AccMethodGenFMeasure() - Constructor for class org.dllearner.learningproblems.AccMethodGenFMeasure
 
AccMethodJaccard - Class in org.dllearner.learningproblems
 
AccMethodJaccard() - Constructor for class org.dllearner.learningproblems.AccMethodJaccard
 
AccMethodJaccard(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodJaccard
 
AccMethodNoWeakness - Interface in org.dllearner.learningproblems
Accuracy Method should implement this interface if it cannot filter weak solutions and thus does not return -1.
AccMethodPredAcc - Class in org.dllearner.learningproblems
 
AccMethodPredAcc() - Constructor for class org.dllearner.learningproblems.AccMethodPredAcc
 
AccMethodPredAcc(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodPredAcc
 
AccMethodPredAccApprox - Class in org.dllearner.learningproblems
 
AccMethodPredAccApprox() - Constructor for class org.dllearner.learningproblems.AccMethodPredAccApprox
 
AccMethodPredAccOCEL - Class in org.dllearner.learningproblems
 
AccMethodPredAccOCEL() - Constructor for class org.dllearner.learningproblems.AccMethodPredAccOCEL
 
AccMethodPredAccOCEL(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodPredAccOCEL
 
AccMethodPredAccWeighted - Class in org.dllearner.learningproblems
 
AccMethodPredAccWeighted() - Constructor for class org.dllearner.learningproblems.AccMethodPredAccWeighted
 
AccMethodPredAccWeighted(boolean) - Constructor for class org.dllearner.learningproblems.AccMethodPredAccWeighted
 
AccMethodThreeValued - Interface in org.dllearner.learningproblems
Implementations of generalised measures according to method in A Note on the Evaluation of Inductive Concept Classification Procedures
AccMethodThreeValuedApproximate - Interface in org.dllearner.learningproblems
Approximation support for @AccMethodThreeValued
AccMethodTwoValued - Interface in org.dllearner.learningproblems
Accuracy calculation with true/false positive/negative
AccMethodTwoValuedApproximate - Interface in org.dllearner.learningproblems
Approximation support for @AccMethodTwoValued
AccMethodWithBeta - Interface in org.dllearner.learningproblems
Accuracy Method with beta factor; the beta factor is used to indicate the coverage on class learning problems.
accuracy - Variable in class org.dllearner.algorithms.celoe.OENode
 
accuracy - Variable in class org.dllearner.algorithms.el.SearchTreeNode
 
accuracy - Variable in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
 
accuracyMethod - Variable in class org.dllearner.learningproblems.ClassLearningProblem
 
accuracyMethod - Variable in class org.dllearner.learningproblems.PosNegLP
 
ActiveLearningAlgorithm - Interface in org.dllearner.core
Active Learning algorithms are those, which can use feedback from an oracle.
add(ExampleContainer) - Static method in class org.dllearner.utilities.examples.ExampleContainer
adds to a global example repository.
add(OWLClassExpression, double, AbstractClassExpressionLearningProblem<? extends Score>) - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionSet
Adds an class expression to this set.
add(EvaluatedDescription<? extends Score>) - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionSet
Adds an evaluated description to this set and ensures that the size does not exceed the limit.
add(OWLAxiom) - Method in class org.dllearner.utilities.owl.OWLAxiomCBDGenerator
 
add(Stat) - Method in class org.dllearner.utilities.statistics.Stat
 
add_escapes(String) - Method in exception org.dllearner.parser.ParseException
Used to convert raw characters to their escaped version when these raw version cannot be used as part of an ASCII string literal.
addAll(Collection<EvaluatedDescriptionPosNeg>) - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionSet
Adds a collection of evaluated description to this set and ensures that the size does not exceed the limit.
addAllowedObjectNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.AbstractSampleGenerator
 
addAllowedObjectNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
addAllowedObjectNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
addAllowedObjectNamespaces(Set<String>) - Method in interface org.dllearner.kb.sparql.ConciseBoundedDescriptionGenerator
 
addAllowedObjectNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
addAllowedObjectNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.SymmetricConciseBoundedDescriptionGeneratorImpl
 
addAllowedObjectNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.TreeBasedConciseBoundedDescriptionGenerator
 
addAllowedPropertyNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.AbstractSampleGenerator
 
addAllowedPropertyNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
addAllowedPropertyNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
addAllowedPropertyNamespaces(Set<String>) - Method in interface org.dllearner.kb.sparql.ConciseBoundedDescriptionGenerator
 
addAllowedPropertyNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
addAllowedPropertyNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.SymmetricConciseBoundedDescriptionGeneratorImpl
 
addAllowedPropertyNamespaces(Set<String>) - Method in class org.dllearner.kb.sparql.TreeBasedConciseBoundedDescriptionGenerator
 
AddAllStringsAsClasses - Class in org.dllearner.kb.manipulator
 
AddAllStringsAsClasses(Rule.Months, String) - Constructor for class org.dllearner.kb.manipulator.AddAllStringsAsClasses
 
addAnonymousIndividualsToSet(Set<OWLAnonymousIndividual>) - Method in class org.dllearner.core.owl.OWLNaryBooleanClassExpressionImplExt
 
addAxiom(OWLAxiom) - Method in class org.dllearner.kb.extraction.OWLAPIOntologyCollector
 
addBlankNode(int, RDFNodeTuple) - Static method in class org.dllearner.kb.aquisitors.BlankNodeCollector
 
addChange(QueryTreeChange) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
addChanges(List<QueryTreeChange>) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
addChild(SearchTreeNode) - Method in class org.dllearner.algorithms.el.SearchTreeNode
 
addChild(ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
addChild(V) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
addChild(QueryTreeImpl<N>) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addChild(QueryTree<N>) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addChild(QueryTree<N>, Object) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addChild(QueryTreeImpl<N>, int) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addChild(QueryTreeImpl<N>, Object) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addChild(QueryTreeImpl<N>, Object, int) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addChild(RDFResourceTree, Node) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
addChild(QueryTreeImpl<N>) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
addChild(QueryTreeImpl<N>, int) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
addChild(QueryTreeImpl<N>, Object) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
addChild(QueryTree<N>, Object) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
addChild(QueryTreeImpl<N>, Object, int) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
addChild(T) - Method in class org.dllearner.core.AbstractSearchTreeNode
add a child node to this node
addChild(SearchTreeNode<T>) - Method in class org.dllearner.core.ref.SearchTreeNodeSimple
 
addChildAt(int, V) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
addChildAt(int, RDFResourceTree, Node_URI) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
addChildren(List<V>) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
addChildren(List<RDFResourceTree>, Node) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
addClause(Clause) - Method in class org.dllearner.prolog.Program
 
addColumn(TableColumn) - Method in class org.dllearner.utilities.statistics.Table
 
addComponentClassName(String) - Static method in class org.dllearner.core.AnnComponentManager
 
addDropFilters(Predicate<Statement>...) - Method in interface org.dllearner.algorithms.qtl.impl.QueryTreeFactory
Adds a set of filters that will be applied on the model before the creation of the query tree.
addDropFilters(Predicate<Statement>...) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryBase
 
addDropFilters(Predicate<Statement>...) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryBaseInv
 
addDropFilters(Predicate<Statement>...) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryCache
 
addEntityTypes(Model) - Static method in class org.dllearner.utilities.owl.OWLEntityTypeAdder
Infers the type of predicates p_i by analyzing the object of the triples using p_i and adds the entity type assertion to the model, i.e.
addEntry(String) - Method in class org.dllearner.utilities.statistics.TableColumn
entires should be in Latex, if the target is latex
addEscapes(String) - Static method in error org.dllearner.parser.TokenMgrError
Replaces unprintable characters by their escaped (or unicode escaped) equivalents in the given string
addFilterNamespace(String) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
addIgnoredProperties(Set<String>) - Method in class org.dllearner.kb.sparql.AbstractSampleGenerator
 
addInNode() - Method in class org.dllearner.kb.sparql.CBDStructureTree
 
addLiteral(Literal) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addLiteral(Literal) - Method in class org.dllearner.prolog.Body
 
addLiterals(Collection<Literal>) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
addNode(T) - Method in class org.dllearner.core.ref.SearchTree
 
addNode(T, T) - Method in class org.dllearner.utilities.datastructures.AbstractSearchTree
add node to the search tree
addNodeToLevel(ELDescriptionNode, int) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
Internal method for updating the node set and the level node mapping.
addNumber(double) - Method in class org.dllearner.utilities.statistics.Stat
Add a number to this object.
addObjectFilter(String) - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
addOntologyURLs() - Method in class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
addOntologyURLs() - Method in class org.dllearner.kb.dataset.BioPortalDataset
 
addOntologyURLs() - Method in class org.dllearner.kb.dataset.TONESDataset
 
addOutNode() - Method in class org.dllearner.kb.sparql.CBDStructureTree
 
addPredicateFilter(String) - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
addPredicateObjectFilter(String, String) - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
addPrefix(String, Map<String, String>) - Static method in class org.dllearner.utilities.QueryUtils
 
addPrefixes(String, String, String) - Static method in class org.dllearner.utilities.QueryUtils
 
addProgressMonitor(ProgressMonitor) - Method in class org.dllearner.kb.extraction.Manager
 
addProgressMonitor(ProgressMonitor) - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
addPropertiesToIgnore(Set<String>) - Method in class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
addPropertiesToIgnore(Set<String>) - Method in class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
addPropertiesToIgnore(Set<String>) - Method in interface org.dllearner.kb.sparql.ConciseBoundedDescriptionGenerator
 
addPropertiesToIgnore(Set<String>) - Method in class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
addPropertiesToIgnore(Set<String>) - Method in class org.dllearner.kb.sparql.SymmetricConciseBoundedDescriptionGeneratorImpl
 
addPropertiesToIgnore(Set<String>) - Method in class org.dllearner.kb.sparql.TreeBasedConciseBoundedDescriptionGenerator
 
addRepository(OntologyRepository) - Method in class org.dllearner.kb.repository.OntologyRepositoryManager
 
addRule(Rule) - Method in class org.dllearner.kb.manipulator.Manipulator
 
addSignatureEntitiesToSet(Set<OWLEntity>) - Method in class org.dllearner.core.owl.OWLNaryBooleanClassExpressionImplExt
 
AddSuggestion - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
addToKnowledgebase(Set<OWLAxiom>) - Method in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
Add the axioms to the running knowledge base.
addToMap(Map<K, J>, K, V) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
addToMap(Map<K, J>, K, Collection<V>) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
addToSearchTree(T, SearchTreeNode<T>) - Method in class org.dllearner.core.ref.RefinementOperatorBasedLearningAlgorithmBase
Checks whether the refinement is allowed to be added to the search tree first by calling #isValid(T refinement)}, and if yes creates a new node which is added to the search tree.
addTriple(RDFResource, RDFResourceIRI, RDFNode) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
 
addTuple(TreeTuple) - Method in class org.dllearner.algorithms.el.Simulation
Adds a tuple to the simulation.
addTypetoJena(OntModel, List<String>, List<String>) - Method in class org.dllearner.utilities.analyse.TypeOntology
 
adjustBeginLineColumn(int, int) - Method in class org.dllearner.parser.SimpleCharStream
Method to adjust line and column numbers for the start of a token.
ALCLearningAlgorithm - Class in org.dllearner.core.ref
 
ALCLearningAlgorithm(OWLOntology, OWLReasoner) - Constructor for class org.dllearner.core.ref.ALCLearningAlgorithm
 
AlgorithmRun - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
All() - Method in class org.dllearner.parser.KBParser
 
ALL - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
allExamples - Variable in class org.dllearner.learningproblems.FuzzyPosNegLP
 
allExamples - Variable in class org.dllearner.learningproblems.PosNegLP
 
allowedConcepts - Variable in class org.dllearner.core.AbstractCELA
 
allowedDataProperties - Variable in class org.dllearner.core.AbstractCELA
 
allowedNamespaces - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
allowedNode(T) - Method in class org.dllearner.utilities.datastructures.AbstractSearchTree
filter certain nodes to be permitted in the node-set
allowedNode(T) - Method in class org.dllearner.utilities.datastructures.SearchTreeNonWeak
 
allowedObjectProperties - Variable in class org.dllearner.core.AbstractCELA
 
ALREADY_DECLARED_QUERY - Variable in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
AnalyzedOWLOntologyDataset - Interface in org.dllearner.kb.dataset
A collection of OWL ontologies that have been analyzed w.r.t.
And() - Method in class org.dllearner.parser.KBParser
 
AND - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
AnnComponentManager - Class in org.dllearner.core
Component manager for the new (as of 2011) annotation based configuration system.
ANYCHAR - Static variable in interface org.dllearner.parser.PrologParserConstants
RegularExpression Id.
aPartContains(String) - Method in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
appendSomeValuesFrom(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.ConceptTransformation
Expand the class expression by adding \exists r.\top for all properties r that are involved in some \forall r.C on the same modal depth.
appendToFile(File, String) - Static method in class org.dllearner.utilities.Files
Appends content to a file.
apply(RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.util.filters.PredicateExistenceFilter
 
apply(T) - Method in interface org.dllearner.algorithms.qtl.util.filters.TreeFilter
Apply the filter and return a new filtered tree.
apply(OWLClassExpression) - Method in class org.dllearner.utilities.OWLCLassExpressionToOWLClassTransformer
 
apply(OWLEntity) - Method in class org.dllearner.utilities.ToIRIFunction
 
applyConfigEntry(AbstractComponent, String, T) - Static method in class org.dllearner.core.AnnComponentManager
Deprecated.
applyEquivalenceRules(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.ConceptTransformation
 
applyLearningAlgorithm(OWLEntity, AxiomType<? extends OWLAxiom>) - Method in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
 
applyNumberRestrictions() - Method in class org.dllearner.utilities.owl.OntologyCloserOWLAPI
counts the number of roles used by each individual and assigns ExactCardinalityRestriction to Individuals
applyNumberRestrictionsConcise() - Method in class org.dllearner.utilities.owl.OntologyCloserOWLAPI
counts the number of roles used by each individual and assigns ExactCardinalityRestriction, but uses only one Intersection: role1 exactly 1 and role2 exactly 2 and ....
applyOperator(Program) - Method in interface org.dllearner.algorithms.hybridgp.GeneticRefinementOperator
 
applyOperator(Program) - Method in class org.dllearner.algorithms.hybridgp.Psi
 
applyPsi(OWLClassExpression, int, int) - Method in class org.dllearner.algorithms.hybridgp.Psi
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.AddAllStringsAsClasses
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.DBPediaNavigatorCityLocatorRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.DBpediaNavigatorFilterRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.DBpediaNavigatorOtherRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.ObjectReplacementRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.PredicateReplacementRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.Rule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.SimpleObjectFilterRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.SimplePredicateFilterRule
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.StringToResource
 
applyRule(Node, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.manipulator.TypeFilterRule
 
areEquals(List<T>, List<T>) - Static method in class org.dllearner.algorithms.decisiontrees.utils.SetUtils
Check if the two lists contain exactly the same elements
as(Class) - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
 
asCheck(ELDescriptionNode) - Method in class org.dllearner.refinementoperators.ELDown
 
asConjunctSet() - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
asCountQuery(OWLClassExpression) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
asDisjunctSet() - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
asEvaluatedDescription() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
asEvaluatedDescription() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
asEvaluatedDescription(QueryTreeImpl.LiteralNodeConversionStrategy) - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
asGraph() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
asGraph(RDFResourceTree, String, PrefixMapping, File) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
 
asJGraphT(Query) - Static method in class org.dllearner.utilities.QueryUtils
 
asJSON() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
asJSON() - Method in class org.dllearner.core.EvaluatedDescription
This convenience method can be used to store and exchange evaluated descriptions by transforming them to a JSON string.
asJSON() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
This convenience method can be used to store and exchange evaluated descriptions by transforming them to a JSON string.
asJSON() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
This convenience method can be used to store and exchange evaluated descriptions by transforming them to a JSON string.
ask(String) - Method in class org.dllearner.kb.sparql.SPARQLTasks
 
ASK_DISJOINT_CLASSES_QUERY - Static variable in class org.dllearner.kb.sparql.SPARQLQueryUtils
 
ASK_EQUIVALENT_CLASSES_QUERY - Static variable in class org.dllearner.kb.sparql.SPARQLQueryUtils
 
ASK_SUBCLASS_OF_QUERY - Static variable in class org.dllearner.kb.sparql.SPARQLQueryUtils
 
asLiteral() - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
asNode() - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
 
asNode(OWLEntity) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Convert an OWL API entity into a JENA API node.
asOWLAxioms(List<Statement>) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Convert statements from JENA API into OWL API axioms.
asOWLClasses(Set<OWLClassExpression>) - Static method in class org.dllearner.algorithms.DisjointClassesLearner
 
asOWLClasses(Set<OWLClassExpression>) - Static method in class org.dllearner.utilities.OWLAPIUtils
Convenience method that converts a set of OWL class expressions to a set of OWL classes.
asOWLClassExpression() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
Converts the query tree in a corresponding OWL class expression.
asOWLClassExpression(QueryTreeImpl.LiteralNodeConversionStrategy) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
Converts the query tree in a corresponding OWL class expression.
asOWLClassExpression() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
asOWLClassExpression(QueryTreeImpl.LiteralNodeConversionStrategy) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
asOWLClassExpression(QueryTree<String>) - Method in class org.dllearner.algorithms.qtl.util.QueryTreeConverter
Returns a OWL class expression of the given query trees.
asOWLClassExpressions(QueryTree<String>) - Method in class org.dllearner.algorithms.qtl.util.QueryTreeConverter
Returns a set of OWL class expression representations of the given query tree.
asOWLEntity(Node, EntityType<T>) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Convert a JENA Node into an OWL entity of the given type.
asQuery(String, OWLAxiom) - Method in class org.dllearner.utilities.owl.OWLAxiomToSPARQLConverter
 
asQuery(String, OWLClassExpression) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
asQuery(String, OWLClassExpression, boolean) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
asQuery(String, OWLClassExpression, Set<? extends OWLEntity>) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
asQuery(String, OWLClassExpression, Set<? extends OWLEntity>, boolean) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
asQueryTree(OWLClassExpression) - Method in class org.dllearner.algorithms.qtl.util.QueryTreeConverter
Converts a OWL class expression into a query tree, if possible.
asResource() - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
asStatements(Set<OWLAxiom>) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Convert OWL axioms from OWL API into JENA API statements.
asTSV(Map<K, V>) - Static method in class org.dllearner.utilities.MapUtils
Return map in TSV format.
asTSV(Map<K, V>, String, String) - Static method in class org.dllearner.utilities.MapUtils
Return map in TSV format.
AsymmetricObjectPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
AsymmetricObjectPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.AsymmetricObjectPropertyAxiomLearner
 
atom() - Method in class org.dllearner.parser.PrologParser
 
Atom - Class in org.dllearner.prolog
 
Atom(String, ArrayList<Term>) - Constructor for class org.dllearner.prolog.Atom
 
AtomicConcept() - Method in class org.dllearner.parser.KBParser
 
atomicConceptsNeg - Variable in class org.dllearner.core.owl.FlatABox
 
atomicConceptsPos - Variable in class org.dllearner.core.owl.FlatABox
 
AutomaticNegativeExampleFinderOWL - Class in org.dllearner.utilities.examples
 
AutomaticNegativeExampleFinderOWL(SortedSet<OWLIndividual>, AbstractReasonerComponent) - Constructor for class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderOWL
takes as input a full positive set to make sure no negatives are added as positives
AutomaticNegativeExampleFinderSPARQL - Class in org.dllearner.utilities.examples
 
AutomaticNegativeExampleFinderSPARQL(SortedSet<String>, SPARQLTasks, SortedSet<String>) - Constructor for class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL
takes as input a full positive set to make sure no negatives are added as positives
AutomaticNegativeExampleFinderSPARQL2 - Class in org.dllearner.utilities.examples
Utility class for automatically retrieving negative examples from a SPARQL endpoint given a set of positive examples.
AutomaticNegativeExampleFinderSPARQL2(SparqlEndpoint) - Constructor for class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
AutomaticNegativeExampleFinderSPARQL2(QueryExecutionFactory) - Constructor for class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
AutomaticNegativeExampleFinderSPARQL2(SPARQLReasoner) - Constructor for class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
AutomaticNegativeExampleFinderSPARQL2.Strategy - Enum in org.dllearner.utilities.examples
 
AutomaticPositiveExampleFinderOWL - Class in org.dllearner.utilities.examples
 
AutomaticPositiveExampleFinderOWL(AbstractReasonerComponent) - Constructor for class org.dllearner.utilities.examples.AutomaticPositiveExampleFinderOWL
 
AutomaticPositiveExampleFinderSPARQL - Class in org.dllearner.utilities.examples
 
AutomaticPositiveExampleFinderSPARQL(SPARQLTasks) - Constructor for class org.dllearner.utilities.examples.AutomaticPositiveExampleFinderSPARQL
 
avg(double[]) - Static method in class org.dllearner.algorithms.decisiontrees.utils.MathUtils
 
AxiomAlgorithms - Class in org.dllearner.algorithms.properties
A utility class that holds links between entity type, axiom types and axiom algorithms.
AxiomAlgorithms() - Constructor for class org.dllearner.algorithms.properties.AxiomAlgorithms
 
AxiomLearningAlgorithm<T extends org.semanticweb.owlapi.model.OWLAxiom> - Interface in org.dllearner.core
 
AxiomLearningProgressMonitor - Interface in org.dllearner.core
The AxiomLearningProgressMonitor interface should be implemented by objects that wish to monitor the progress of an axiom learning algorithm.
AxiomScore - Class in org.dllearner.learningproblems
 
AxiomScore(double) - Constructor for class org.dllearner.learningproblems.AxiomScore
 
AxiomScore(double, boolean) - Constructor for class org.dllearner.learningproblems.AxiomScore
 
AxiomScore(double, double) - Constructor for class org.dllearner.learningproblems.AxiomScore
 
AxiomScore(double, double, boolean) - Constructor for class org.dllearner.learningproblems.AxiomScore
 
AxiomScore(double, double, int, int) - Constructor for class org.dllearner.learningproblems.AxiomScore
 
AxiomScore(double, double, int, int, boolean) - Constructor for class org.dllearner.learningproblems.AxiomScore
 
AxiomScoreCalculator - Interface in org.dllearner.core
 
axiomType - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
axiomTypes - Variable in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
 

B

b - Variable in class org.dllearner.kb.extraction.PropertyNode
 
b - Variable in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
b - Variable in class org.dllearner.utilities.datastructures.StringTuple
 
backup(int) - Method in class org.dllearner.parser.SimpleCharStream
Backup a number of characters.
BaseReasoner - Interface in org.dllearner.core
Contains the following reasoning/query operations: queries for elements contained in the knowledge base (classes, properties, ...) basic reasoning requests related to the knowledge base as a whole (e.g.
baseURI - Variable in class org.dllearner.core.AbstractCELA
 
beam - Variable in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
beginColumn - Variable in class org.dllearner.parser.Token
The column number of the first character of this Token.
beginLine - Variable in class org.dllearner.parser.Token
The line number of the first character of this Token.
BeginToken() - Method in class org.dllearner.parser.SimpleCharStream
Start.
belongsTo - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
best() - Method in class org.dllearner.utilities.datastructures.AbstractSearchTree
 
bestEvaluatedDescriptions - Variable in class org.dllearner.core.AbstractCELA
 
beta - Variable in class org.dllearner.algorithms.properties.DataPropertyHierarchyAxiomLearner
 
beta - Variable in class org.dllearner.algorithms.properties.ObjectPropertyHierarchyAxiomLearner
 
beta - Variable in class org.dllearner.learningproblems.AccMethodAMeasure
 
beta - Variable in class org.dllearner.learningproblems.AccMethodFMeasure
 
binaryClassification - Variable in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
BioPortalDataset - Class in org.dllearner.kb.dataset
 
BioPortalDataset(File) - Constructor for class org.dllearner.kb.dataset.BioPortalDataset
 
BioPortalRepository - Class in org.dllearner.kb.repository.bioportal
 
BioPortalRepository() - Constructor for class org.dllearner.kb.repository.bioportal.BioPortalRepository
 
BlankNode - Class in org.dllearner.kb.extraction
 
BlankNode(RDFBlankNode, String) - Constructor for class org.dllearner.kb.extraction.BlankNode
 
BlankNodeCollector - Class in org.dllearner.kb.aquisitors
 
BlankNodeCollector() - Constructor for class org.dllearner.kb.aquisitors.BlankNodeCollector
 
BlanknodeResolvingCBDGenerator - Class in org.dllearner.kb.sparql
 
BlanknodeResolvingCBDGenerator(Model) - Constructor for class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
body() - Method in class org.dllearner.parser.PrologParser
 
Body - Class in org.dllearner.prolog
 
Body() - Constructor for class org.dllearner.prolog.Body
 
bottom - Variable in class org.dllearner.core.owl.FlatABox
 
Bottom() - Method in class org.dllearner.parser.KBParser
 
BOTTOM - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
bPartContains(String) - Method in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
BruteForceNBRStrategy - Class in org.dllearner.algorithms.qtl.operations.nbr.strategy
 
BruteForceNBRStrategy() - Constructor for class org.dllearner.algorithms.qtl.operations.nbr.strategy.BruteForceNBRStrategy
 
bufcolumn - Variable in class org.dllearner.parser.SimpleCharStream
 
buffer - Variable in class org.dllearner.parser.SimpleCharStream
 
bufline - Variable in class org.dllearner.parser.SimpleCharStream
 
bufpos - Variable in class org.dllearner.parser.SimpleCharStream
Position in buffer.
buildQueryExecutionFactory() - Method in class org.dllearner.kb.LocalModelBasedSparqlEndpointKS
 
buildQueryExecutionFactory() - Method in class org.dllearner.kb.SparqlEndpointKS
 

C

Cache - Class in org.dllearner.kb.sparql
SPARQL query cache to avoid possibly expensive multiple queries.
Cache(String) - Constructor for class org.dllearner.kb.sparql.Cache
Constructor for the cache itself.
Cache(String, boolean) - Constructor for class org.dllearner.kb.sparql.Cache
 
cacheDir - Variable in class org.dllearner.kb.SparqlEndpointKS
 
cacheTTL - Variable in class org.dllearner.kb.SparqlEndpointKS
 
CachingConciseBoundedDescriptionGenerator - Class in org.dllearner.kb.sparql
 
CachingConciseBoundedDescriptionGenerator(ConciseBoundedDescriptionGenerator) - Constructor for class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
calcolaPlausibilityFunction(List<T>) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
Compute the plausibility function value
calculateScore(OWLAxiom) - Method in interface org.dllearner.core.AxiomScoreCalculator
 
calculateScore(OWLAxiom) - Method in class org.dllearner.core.ProbabilityBasedAxiomScoreCalculator
 
canAs(Class) - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
 
CBDStructureTree - Class in org.dllearner.kb.sparql
 
CBDStructureTree() - Constructor for class org.dllearner.kb.sparql.CBDStructureTree
 
CBDStructureTree(String) - Constructor for class org.dllearner.kb.sparql.CBDStructureTree
 
ccp - Variable in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
CELOE - Class in org.dllearner.algorithms.celoe
The CELOE (Class Expression Learner for Ontology Engineering) algorithm.
CELOE() - Constructor for class org.dllearner.algorithms.celoe.CELOE
 
CELOE(CELOE) - Constructor for class org.dllearner.algorithms.celoe.CELOE
 
CELOE(AbstractClassExpressionLearningProblem, AbstractReasonerComponent) - Constructor for class org.dllearner.algorithms.celoe.CELOE
 
CELOEWrapper - Class in org.dllearner.algorithms
A wrapper class for CELOE that allows for returning the result in forms of OWL axioms.
CELOEWrapper(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.CELOEWrapper
 
centroidOf(Collection<QueryTreePoint>) - Method in class org.dllearner.algorithms.qtl.util.QueryTreePoint
 
changeLearningProblem(AbstractClassExpressionLearningProblem) - Method in class org.dllearner.core.AbstractCELA
Call this when you want to change the learning problem, but leave everything else as is.
changeReasonerComponent(AbstractReasonerComponent) - Method in class org.dllearner.core.AbstractCELA
Call this when you want to change the reasoning service, but leave everything else as is.
changeReasonerComponent(AbstractReasonerComponent) - Method in class org.dllearner.core.AbstractClassExpressionLearningProblem
 
changeReasonerComponent(AbstractReasonerComponent) - Method in class org.dllearner.core.AbstractLearningProblem
Method to exchange the reasoner underlying the learning problem.
ChangeSet - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
changeSources(Set<KnowledgeSource>) - Method in class org.dllearner.core.AbstractReasonerComponent
Method to exchange the reasoner underlying the learning problem.
checkClass(Node) - Method in class org.dllearner.kb.manipulator.TypeFilterRule
 
checkConcepts(AbstractReasonerComponent, Set<OWLClass>) - Static method in class org.dllearner.utilities.Helper
Checks whether the roles exist in background knowledge
checkEntities(AbstractReasonerComponent, Set<T>) - Static method in class org.dllearner.utilities.Helper
Checks whether the entities exist in background knowledge
checkIfDirEndsOnSlashAndRemove(String) - Static method in class org.dllearner.utilities.StringFormatter
 
checkIntersection(OWLObjectIntersectionOf) - Static method in class org.dllearner.refinementoperators.RhoDRDown
 
checkRoles(AbstractReasonerComponent, Set<OWLObjectProperty>) - Static method in class org.dllearner.utilities.Helper
Checks whether the roles exist in background knowledge
checkSC(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
checkSC1(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
checkSC2(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
checkURIforValidity(String) - Method in class org.dllearner.kb.aquisitors.TupleAquisitor
 
children - Variable in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
children - Variable in class org.dllearner.core.AbstractSearchTreeNode
 
children - Variable in class org.dllearner.core.ref.SearchTreeNodeSimple
 
chunkCount - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
chunkSize - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
CLASS_INFORMATION - Variable in class org.dllearner.kb.aquisitors.TupleAquisitor
 
CLASS_OVERLAP_QUERY - Static variable in class org.dllearner.algorithms.DisjointClassesLearner
 
ClassAsInstanceLearningProblem - Class in org.dllearner.learningproblems
A learning problem in which positive and negative examples are classes, i.e.
ClassAsInstanceLearningProblem() - Constructor for class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
ClassBasedSampleGenerator - Class in org.dllearner.kb.sparql
Computes a sample fragment of the knowledge base given an OWL class.
ClassBasedSampleGenerator(SparqlEndpointKS) - Constructor for class org.dllearner.kb.sparql.ClassBasedSampleGenerator
 
CLASSES_FOR_INSTANCES - Variable in class org.dllearner.kb.aquisitors.TupleAquisitor
 
ClassExpressionLearningAlgorithm - Interface in org.dllearner.core
Basic interface for algorithms learning OWL/DL class expressions.
ClassExpressionLiteralCombination - Class in org.dllearner.algorithms.qtl.util
 
ClassExpressionLiteralCombination() - Constructor for class org.dllearner.algorithms.qtl.util.ClassExpressionLiteralCombination
 
classExpressionPropertyExpander(OWLClassExpression, AbstractReasonerComponent, OWLDataFactory, boolean) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
classExpressionPropertyExpander(OWLClassExpression, AbstractReasonerComponent, OWLDataFactory) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
classExpressionPropertyExpanderChecked(OWLClassExpression, AbstractReasonerComponent, OWLDataFactory, Logger) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
classExpressionPropertyExpanderChecked(OWLClassExpression, AbstractReasonerComponent, OWLDataFactory, Supplier<OWLClassExpression>, Logger, boolean) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
classExpressionPropertyExpanderChecked(OWLClassExpression, AbstractReasonerComponent, OWLDataFactory, Supplier<OWLClassExpression>, Logger) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
classExpressionPropertyExpanderChecked(OWLClassExpression, AbstractReasonerComponent, OWLDataFactory, boolean, Logger) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
ClassExpressionRefinementOperator - Interface in org.dllearner.core.ref
 
ClassExpressionRefinementOperatorBase - Class in org.dllearner.core.ref
 
ClassExpressionRefinementOperatorBase(OWLReasoner, OWLDataFactory) - Constructor for class org.dllearner.core.ref.ClassExpressionRefinementOperatorBase
 
ClassHierarchy - Class in org.dllearner.core.owl
Represents a class subsumption hierarchy (ignoring equivalent concepts).
ClassHierarchy(SortedMap<OWLClassExpression, SortedSet<OWLClassExpression>>, SortedMap<OWLClassExpression, SortedSet<OWLClassExpression>>) - Constructor for class org.dllearner.core.owl.ClassHierarchy
The arguments specify the superclasses and subclasses of each class.
classify(OWLIndividual, DLTree) - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
classifyExample(OWLIndividual, DLTree) - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
classifyExample(List<Integer>, OWLIndividual, DLTree) - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
Alternative exploration of a Tree classifier for DL ontology
classifyExamplesDST(OWLIndividual, DSTDLTree) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
classifyIndividuals(List<OWLIndividual>) - Method in interface org.dllearner.core.Oracle
This method should be called by a learning algorithm if it wants a list of individuals (including the special case of a single individual) to be classified by the oracle.
ClassIndexer - Class in org.dllearner.kb.sparql.simple
Indexes an Ontology skips complex classes per default, this does not affect the hierarchy outcome
ClassIndexer() - Constructor for class org.dllearner.kb.sparql.simple.ClassIndexer
 
ClassLearningProblem - Class in org.dllearner.learningproblems
The problem of learning the OWL class expression of an existing class in an OWL ontology.
ClassLearningProblem() - Constructor for class org.dllearner.learningproblems.ClassLearningProblem
 
ClassLearningProblem(AbstractReasonerComponent) - Constructor for class org.dllearner.learningproblems.ClassLearningProblem
 
classLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
ClassNode - Class in org.dllearner.kb.extraction
Is a node in the graph, that is a class.
ClassNode(String) - Constructor for class org.dllearner.kb.extraction.ClassNode
 
ClassScore - Class in org.dllearner.learningproblems
The score of a class in ontology engineering.
ClassScore(Set<OWLIndividual>, Set<OWLIndividual>, double, Set<OWLIndividual>, double, double) - Constructor for class org.dllearner.learningproblems.ClassScore
 
ClassScore(Set<OWLIndividual>, Set<OWLIndividual>, double, Set<OWLIndividual>, double, double, boolean, boolean) - Constructor for class org.dllearner.learningproblems.ClassScore
 
classToDescribe - Variable in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
classToDescribe - Variable in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
clause() - Method in class org.dllearner.parser.PrologParser
 
Clause - Class in org.dllearner.prolog
 
Clause(Atom, Body) - Constructor for class org.dllearner.prolog.Clause
 
cleanConcept(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.ConceptTransformation
 
cleanConceptNonRecursive(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.ConceptTransformation
 
cleaningTimeNs - Static variable in class org.dllearner.utilities.owl.ConceptTransformation
 
clearCache() - Method in class org.dllearner.kb.sparql.Cache
deletes all Files in the cacheDir, does not delete the cacheDir itself, and can thus still be used without creating a new Cache Object
clearChildren() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
clearFile(File) - Static method in class org.dllearner.utilities.Files
 
clone() - Method in class org.dllearner.algorithms.celoe.CELOE
 
clone() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
clone() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
 
clone() - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
clone() - Method in class org.dllearner.algorithms.gp.OWLClassExpressionTree
 
clone() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
clone() - Method in class org.dllearner.algorithms.qtl.QTL2Disjunctive
 
clone() - Method in class org.dllearner.algorithms.qtl.QTL2DisjunctiveMultiThreaded
 
clone() - Method in class org.dllearner.core.owl.ClassHierarchy
 
clone() - Method in class org.dllearner.core.owl.DatatypePropertyHierarchy
 
clone() - Method in class org.dllearner.core.owl.LazyClassHierarchy
 
clone() - Method in class org.dllearner.core.owl.ObjectPropertyHierarchy
 
clone() - Method in class org.dllearner.learningproblems.PosNegLPStandard
 
clone() - Method in class org.dllearner.prolog.Function
 
clone() - Method in class org.dllearner.prolog.List
 
clone() - Method in class org.dllearner.prolog.Number
 
clone() - Method in class org.dllearner.prolog.PrologConstant
 
clone() - Method in class org.dllearner.prolog.StringConstant
 
clone() - Method in class org.dllearner.prolog.Term
 
clone() - Method in class org.dllearner.prolog.Variable
 
clone(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.OWLClassExpressionUtils
Returns a clone of the given class expression.
cloneAndRestrict(Set<? extends T>) - Method in class org.dllearner.core.owl.AbstractHierarchy
The method computes a new subsumption hierarchy, which is a copy of this one, but only the specified entities are allowed to occur.
cloneAndRestrict(Set<? extends OWLClassExpression>) - Method in class org.dllearner.core.owl.LazyClassHierarchy
 
cloneOld() - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
closeConnection() - Method in class org.dllearner.kb.sparql.ExtractionDBCache
 
ClosedWorldReasoner - Class in org.dllearner.reasoning
Reasoner for fast instance checks.
ClosedWorldReasoner() - Constructor for class org.dllearner.reasoning.ClosedWorldReasoner
 
ClosedWorldReasoner(TreeSet<OWLIndividual>, Map<OWLClass, TreeSet<OWLIndividual>>, Map<OWLObjectProperty, Map<OWLIndividual, SortedSet<OWLIndividual>>>, Map<OWLDataProperty, Map<OWLIndividual, SortedSet<Integer>>>, Map<OWLDataProperty, TreeSet<OWLIndividual>>, Map<OWLDataProperty, TreeSet<OWLIndividual>>, KnowledgeSource...) - Constructor for class org.dllearner.reasoning.ClosedWorldReasoner
 
ClosedWorldReasoner(Set<KnowledgeSource>) - Constructor for class org.dllearner.reasoning.ClosedWorldReasoner
 
ClosedWorldReasoner(KnowledgeSource...) - Constructor for class org.dllearner.reasoning.ClosedWorldReasoner
 
ClosedWorldReasoner(OWLAPIReasoner) - Constructor for class org.dllearner.reasoning.ClosedWorldReasoner
 
ClosedWorldReasoner.DisjointnessSemantics - Enum in org.dllearner.reasoning
There are different ways on how disjointness between classes can be assumed.
ClosedWorldReasoner.ForallSemantics - Enum in org.dllearner.reasoning
 
cnt - Static variable in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
cnt - Static variable in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
column - Variable in class org.dllearner.parser.SimpleCharStream
 
Combination - Class in org.dllearner.algorithms.decisiontrees.utils
Methoden zur Erzeugung von Kombinationen.
combineEvidences(MassFunction) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
combineEvidences(MassFunction...) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
Dempster rule for more BBAs
combineEvidencesDuboisPrade(MassFunction) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
Implementation of Dubois-Prade combination rule
combineEvidencesDuboisPrade(MassFunction...) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
combineWith(SparqlQueryMaker) - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
COMMAND_END - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
commission - Variable in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
CommonConfigOptions - Class in org.dllearner.core.options
Contains methods for creating common configuration options, i.e.
CommonConfigOptions() - Constructor for class org.dllearner.core.options.CommonConfigOptions
 
compare(SearchTreeNode, SearchTreeNode) - Method in class org.dllearner.algorithms.el.DisjunctiveHeuristic
 
compare(ELDescriptionEdge, ELDescriptionEdge) - Method in class org.dllearner.algorithms.el.ELDescriptionEdgeComparator
 
compare(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionNodeComparator
 
compare(ELDescriptionTree, ELDescriptionTree) - Method in class org.dllearner.algorithms.el.ELDescriptionTreeComparator
 
compare(SearchTreeNode, SearchTreeNode) - Method in class org.dllearner.algorithms.el.StableHeuristic
 
compare(TreeAndRoleSet, TreeAndRoleSet) - Method in class org.dllearner.algorithms.el.TreeAndRoleSetComparator
 
compare(ExampleBasedNode, ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.FlexibleHeuristic
 
compare(ExampleBasedNode, ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.LexicographicHeuristic
 
compare(ExampleBasedNode, ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
compare(ExampleBasedNode, ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.NodeComparatorStable
 
compare(ExampleBasedNode, ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.SubsumptionComparator
 
compare(OWLClassExpression, OWLClassExpression) - Method in class org.dllearner.algorithms.ocel.SubsumptionComparator
 
compare(OWLClassExpression, OWLClassExpression) - Method in class org.dllearner.algorithms.pattern.OWLClassExpressionOrderingComparator
 
compare(OWLObject, OWLObject) - Method in class org.dllearner.algorithms.pattern.OWLObjectComparator
 
compare(EvaluatedRDFResourceTree, EvaluatedRDFResourceTree) - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeHeuristic
 
compare(Node, Node) - Method in class org.dllearner.algorithms.qtl.util.NodeComparatorInv
 
compare(Statement, Statement) - Method in class org.dllearner.algorithms.qtl.util.StatementComparator
 
compare(OENode, OENode) - Method in class org.dllearner.core.AbstractHeuristic
 
compare(T, T) - Method in class org.dllearner.utilities.NumberComparator
 
compare(EvaluatedDescription<? extends Score>, EvaluatedDescription<? extends Score>) - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionComparator
 
compare(EvaluatedDescriptionPosNeg, EvaluatedDescriptionPosNeg) - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionPosNegComparator
 
compareObjectOfSameType(OWLObject) - Method in class org.dllearner.core.owl.OWLNaryBooleanClassExpressionImplExt
 
compareTo(EvaluatedRDFResourceTree) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
compareTo(RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
compareTo(NodeInv) - Method in class org.dllearner.algorithms.qtl.datastructures.NodeInv
 
compareTo(EvaluatedQueryTree<N>) - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
compareTo(EvaluatedAxiom<T>) - Method in class org.dllearner.core.EvaluatedAxiom
 
compareTo(EvaluatedHypothesis<T, S>) - Method in class org.dllearner.core.EvaluatedHypothesis
 
compareTo(FuzzyIndividual) - Method in class org.dllearner.core.owl.fuzzydll.FuzzyIndividual
 
compareTo(OntologyBean) - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
compareTo(DescriptionSubsumptionTree.Node) - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
 
compareTo(RDFNodeTuple) - Method in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
compareTo(StringTuple) - Method in class org.dllearner.utilities.datastructures.StringTuple
 
compareTo(ExampleContainer) - Method in class org.dllearner.utilities.examples.ExampleContainer
 
compareTo(PropertyContext) - Method in class org.dllearner.utilities.owl.PropertyContext
 
Component - Interface in org.dllearner.core
Base interface of all components.
ComponentAnn - Annotation Type in org.dllearner.core
Annotation for DL-Learner components.
ComponentInitException - Exception in org.dllearner.core
Exception which is thrown when a component cannot be intialised, e.g.
ComponentInitException(String) - Constructor for exception org.dllearner.core.ComponentInitException
Creates a ComponentInitException with the specified message.
ComponentInitException(Throwable) - Constructor for exception org.dllearner.core.ComponentInitException
Creates a ComponentInitException with the specified cause.
ComponentInitException(String, Throwable) - Constructor for exception org.dllearner.core.ComponentInitException
Creates a ComponentInitException with the specified message and cause.
compose(ArrayList<Term>) - Static method in class org.dllearner.prolog.List
 
computeApplicableDatatypeProperties(OWLClassExpression) - Method in class org.dllearner.refinementoperators.Utility
Compute the set of applicable data properties for a given description.
computeApplicableObjectProperties(OWLClassExpression) - Method in class org.dllearner.refinementoperators.Utility
Compute the set of applicable object properties for a given description.
computeBeliefFunction(List<T>) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
Compute the belief function value
computeConcepts(AbstractReasonerComponent) - Static method in class org.dllearner.utilities.Helper
 
computeConceptsUsingIgnoreList(AbstractReasonerComponent, Set<OWLClass>) - Static method in class org.dllearner.utilities.Helper
 
computeDisjointess(OWLClass, OWLClass) - Method in class org.dllearner.algorithms.DisjointClassesLearner
 
computeDisjointness(Set<OWLClass>) - Method in class org.dllearner.algorithms.DisjointClassesLearner
 
computeEntities(AbstractReasonerComponent, EntityType<T>) - Static method in class org.dllearner.utilities.Helper
 
computeEntitiesUsingIgnoreList(AbstractReasonerComponent, EntityType<T>, Set<T>) - Static method in class org.dllearner.utilities.Helper
 
computeKappa(short[][]) - Static method in class org.dllearner.utilities.statistics.FleissKappa
Computes the Kappa value
computeLCS(LCS.RootedRDFGraph, LCS.RootedRDFGraph) - Method in class org.dllearner.algorithms.qtl.operations.lcs.LCS
 
computeLevel() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
Traverses the tree until the root node and counts how many edges are traversed.
computeLGG(RDFResourceTree, RDFResourceTree, boolean) - Method in class org.dllearner.algorithms.qtl.operations.lgg.AbstractLGGGenerator
 
computeMgr(Set<OWLObjectProperty>) - Method in class org.dllearner.refinementoperators.Utility
Given a set of applicable object properties, this method returns the most general ones, i.e.
computeMgrDP(Set<OWLDataProperty>) - Method in class org.dllearner.refinementoperators.Utility
Given a set of applicable data properties, this method returns the most general ones, i.e.
computeNBR(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.strategy.BruteForceNBRStrategy
 
computeNBR(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.strategy.GreedyNBRStrategy
 
computeNBR(RDFResourceTree, List<RDFResourceTree>) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.strategy.NBRStrategy
 
computeNBR(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.strategy.TagNonSubsumingPartsNBRStrategy
 
computeNBRs(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.strategy.BruteForceNBRStrategy
 
computeNBRs(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.strategy.GreedyNBRStrategy
 
computeNBRs(RDFResourceTree, List<RDFResourceTree>) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.strategy.NBRStrategy
 
computeNBRs(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.strategy.TagNonSubsumingPartsNBRStrategy
 
computeRawAgreement(short[][]) - Static method in class org.dllearner.utilities.statistics.RawAgreement
 
computeSchemaDisjointness() - Method in class org.dllearner.algorithms.DisjointClassesLearner
 
computeScore(int, int, int) - Method in class org.dllearner.algorithms.properties.DisjointDataPropertyAxiomLearner
 
computeScore(int, int, int) - Method in class org.dllearner.algorithms.properties.DisjointObjectPropertyAxiomLearner
 
computeScore(int, int, int) - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
computeScore(int, int) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
computeScore(int, int, boolean) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
computeScore(V) - Method in class org.dllearner.core.AbstractLearningProblem
Computes the Score of a given hypothesis with respect to this learning problem.
computeScore(V, double) - Method in class org.dllearner.core.AbstractLearningProblem
Computes the Score of a given hypothesis with respect to this learning problem.
computeScore(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
computeScore(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
computeScore(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
computeScore(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosNegLPStandard
Computes score of a given concept using the reasoner.
computeScore(OWLClassExpression) - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
computeScore(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
computeScore(OWLClassExpression) - Method in class org.dllearner.learningproblems.PosNegUndLP
 
computeScore(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosOnlyLP
 
computeScore(T, double) - Method in class org.dllearner.learningproblems.PropertyAxiomLearningProblem
 
computeSplits() - Method in class org.dllearner.utilities.split.AbstractValuesSplitter
Computes a sorted list of split values for each appropriate data property.
computeSplits(OWLDataProperty) - Method in class org.dllearner.utilities.split.DefaultDateTimeValuesSplitter
 
computeSplits(OWLDataProperty) - Method in class org.dllearner.utilities.split.DefaultNumericValuesSplitter
 
computeSplits(OWLDataProperty) - Method in class org.dllearner.utilities.split.OptimizedNumericValuesSplitter
 
computeSplits() - Method in interface org.dllearner.utilities.split.ValuesSplitter
Computes split literals for all applicable data properties in the ontology
computeSplits(OWLDataProperty) - Method in interface org.dllearner.utilities.split.ValuesSplitter
Computes split literals for the given data property
computeSplitValues(OWLDataProperty) - Method in class org.dllearner.utilities.split.OptimizedNumericValuesSplitter
 
computeStartNode() - Method in class org.dllearner.core.ref.ALCLearningAlgorithm
 
computeStartNode() - Method in class org.dllearner.core.ref.RefinementOperatorBasedLearningAlgorithmBase
 
Concept() - Method in class org.dllearner.parser.KBParser
 
conceptRewrite(String, SPARQLTasks, int) - Static method in class org.dllearner.kb.sparql.SparqlQueryDescriptionConvertRDFS
replaces each String representing a concept in descriptionKBSyntax with a union of the subclasses ex: (c sub b); (b sub a ) then: (a AND b) will be ((a OR b OR c) AND (b OR a))
concepts - Variable in class org.dllearner.core.owl.FlatABox
 
ConceptTransformation - Class in org.dllearner.utilities.owl
Concept transformation and concept checking methods.
ConceptTransformation() - Constructor for class org.dllearner.utilities.owl.ConceptTransformation
 
ConciseBoundedDescriptionGenerator - Interface in org.dllearner.kb.sparql
According to the definition at http://www.w3.org/Submission/CBD/
ConciseBoundedDescriptionGeneratorImpl - Class in org.dllearner.kb.sparql
ConciseBoundedDescriptionGeneratorImpl(SparqlEndpoint, CacheFrontend) - Constructor for class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
ConciseBoundedDescriptionGeneratorImpl(QueryExecutionFactory) - Constructor for class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
ConciseBoundedDescriptionGeneratorImpl(SparqlEndpoint, String) - Constructor for class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
ConciseBoundedDescriptionGeneratorImpl(SparqlEndpoint) - Constructor for class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
ConciseBoundedDescriptionGeneratorImpl(Model) - Constructor for class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
confidence - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
ConfigOption - Annotation Type in org.dllearner.core.config
Annotation for all DL-Learner configuration options.
Configuration - Class in org.dllearner.kb.extraction
Stores all configuration settings.
Configuration(TupleAquisitor, Manipulator, int, boolean, boolean, boolean, int, boolean) - Constructor for class org.dllearner.kb.extraction.Configuration
 
Configuration(TupleAquisitor, Manipulator, int, boolean, boolean, boolean, int, boolean, OWLAPIOntologyCollector) - Constructor for class org.dllearner.kb.extraction.Configuration
 
ConsoleAxiomLearningProgressMonitor - Class in org.dllearner.core
A progress monitor for axiom learning algorithms which prints to the console.
ConsoleAxiomLearningProgressMonitor() - Constructor for class org.dllearner.core.ConsoleAxiomLearningProgressMonitor
 
Constant - Class in org.dllearner.prolog
 
Constant() - Constructor for class org.dllearner.prolog.Constant
 
Constants - Class in org.dllearner
 
Constants() - Constructor for class org.dllearner.Constants
 
Constants.State - Enum in org.dllearner
 
contains(T) - Method in class org.dllearner.core.owl.AbstractHierarchy
 
contains(T) - Method in interface org.dllearner.core.owl.Hierarchy
Checks whether the entity is contained in the hierarchy.
containsConjunct(OWLClassExpression) - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
containsDoubleObjectSomeRestriction(OWLClassExpression) - Static method in class org.dllearner.refinementoperators.MathOperations
Returns true if the same property is used twice in an object some restriction, e.g.
ContextDescription - Class in org.dllearner.core.owl
A class OWLClassExpression in its context, i.e.
ContextDescription(OWLClassExpression, OWLClassExpression) - Constructor for class org.dllearner.core.owl.ContextDescription
 
convert(Map<String, String>) - Method in class org.dllearner.utilities.datastructures.MapToStringTupleListConverter
 
convert(String, SortedSet<String>) - Static method in class org.dllearner.utilities.examples.ExampleDataCollector
 
convert(OWLOntology) - Method in interface org.dllearner.utilities.owl.OntologyToByteConverter
Convert the ontology into a byte array.
convert(byte[], OWLOntologyManager) - Method in interface org.dllearner.utilities.owl.OntologyToByteConverter
Convert bytes into an Ontology registered with manager.
convert(OWLAxiom, boolean) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
Converts an OWL axioms to a SPARQL 1.1 Update command.
convert(Collection<OWLAxiom>, boolean) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
Converts a set of OWL axioms to a SPARQL 1.1 Update command.
convert(OWLOntologyChange) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
Converts an OWL ontology change to a SPARQL 1.1 Update command.
convert(List<OWLOntologyChange>) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
Converts a list of OWL ontology changes to a SPARQL 1.1 Update command.
convert(String, OWLAxiom) - Method in class org.dllearner.utilities.owl.OWLAxiomToSPARQLConverter
 
convert(String, OWLClassExpression) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
convert(String, OWLPropertyExpression) - Method in class org.dllearner.utilities.owl.OWLClassExpressionToSPARQLConverter
 
convert(OWLOntology) - Method in class org.dllearner.utilities.owl.SimpleOntologyToByteConverter
 
convert(byte[], OWLOntologyManager) - Method in class org.dllearner.utilities.owl.SimpleOntologyToByteConverter
 
convert(OWLClassExpression) - Method in class org.dllearner.utilities.OWLClassExpression2FuzzyDLConverter
 
convertJSONtoResultSet(String) - Static method in class org.dllearner.kb.sparql.SparqlQuery
Converts from JSON to internal Jena format.
convertJSONtoXML(String) - Static method in class org.dllearner.kb.sparql.SparqlQuery
Converts from JSON to xml format.
convertLiteral(Literal) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
Converts a JENA API Literal object into an OWL API OWLLiteral object.
convertResultSetToJSON(ResultSet) - Static method in class org.dllearner.kb.sparql.SparqlQuery
Converts Jena result set to JSON.
convertResultSetToXMLString(ResultSetRewindable) - Static method in class org.dllearner.kb.sparql.SparqlQuery
Converts Jena result set to XML.
convertStatDoubleToLatex(Stat, int, boolean) - Static method in class org.dllearner.utilities.StringFormatter
 
convertStatDoubleToLatex(Stat, int, String, String, boolean) - Static method in class org.dllearner.utilities.StringFormatter
 
convertStatPercentageToLatex(Stat, int, boolean, boolean) - Static method in class org.dllearner.utilities.StringFormatter
 
convMonitorToString(Monitor) - Static method in class org.dllearner.utilities.JamonMonitorLogger
 
coreComponentClasses - Static variable in class org.dllearner.core.AnnComponentManager
 
correctOntologies - Variable in class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
correctSubdirectory - Variable in class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
COUNT - Static variable in class org.dllearner.utilities.JamonMonitorLogger
 
COUNT_QUERY - Variable in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
Couple<S,T> - Class in org.dllearner.algorithms.decisiontrees.utils
 
Couple() - Constructor for class org.dllearner.algorithms.decisiontrees.utils.Couple
 
Coverage() - Constructor for class org.dllearner.utilities.ReasoningUtils.Coverage
 
Coverage3() - Constructor for class org.dllearner.utilities.ReasoningUtils.Coverage3
 
Coverage3Count() - Constructor for class org.dllearner.utilities.ReasoningUtils.Coverage3Count
 
CoverageAdapter - Class in org.dllearner.utilities
Implicit class to interpret CoverageCount as tp/fp/fn/fp
CoverageAdapter() - Constructor for class org.dllearner.utilities.CoverageAdapter
 
CoverageAdapter.CoverageAdapter2 - Class in org.dllearner.utilities
 
CoverageAdapter.CoverageCountAdapter2 - Class in org.dllearner.utilities
 
CoverageAdapter2(ReasoningUtils.Coverage[]) - Constructor for class org.dllearner.utilities.CoverageAdapter.CoverageAdapter2
 
CoverageCount() - Constructor for class org.dllearner.utilities.ReasoningUtils.CoverageCount
 
CoverageCountAdapter2(ReasoningUtils.CoverageCount[]) - Constructor for class org.dllearner.utilities.CoverageAdapter.CoverageCountAdapter2
 
create(String, String) - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
create(String, List<String>) - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
create(String, List<String>, List<String>) - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
createFile(File, String) - Static method in class org.dllearner.utilities.Files
Creates a new file with the given content or replaces the content of a file.
createID() - Static method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
createMultiMap(Map<K, ? extends Iterable<V>>) - Static method in class org.dllearner.utilities.MapUtils
Constructs a multimap with the same mappings as the specified map.
createNode(T, SearchTreeNode<T>) - Method in class org.dllearner.core.ref.RefinementOperatorBasedLearningAlgorithmBase
 
createOWLOntology(OWLOntologyManager) - Method in class org.dllearner.kb.KBFile
 
createOWLOntology(OWLOntologyManager) - Method in class org.dllearner.kb.OWLAPIOntology
 
createOWLOntology(OWLOntologyManager) - Method in class org.dllearner.kb.OWLFile
 
createOWLOntology(OWLOntologyManager) - Method in interface org.dllearner.kb.OWLOntologyKnowledgeSource
Create an OWL Ontology associated with the specified manager.
createOWLOntology(OWLOntologyManager) - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
createOWLOntology(OWLOntologyManager) - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
createQuery(Set<String>, String) - Method in class org.dllearner.kb.sparql.simple.ABoxQueryGenerator
 
createQuery(Set<String>, String) - Method in class org.dllearner.kb.sparql.simple.TBoxQueryGenerator
 
createSortedMultiMap(Map<K, ? extends Iterable<V>>) - Static method in class org.dllearner.utilities.MapUtils
Creates a Guava sorted multimap using the input map.
createTableFromSerializedColumsInDir(String, String) - Static method in class org.dllearner.utilities.statistics.Table
 
createTableFromSerializedColumsInFile(String, String) - Static method in class org.dllearner.utilities.statistics.Table
 
Creation - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
creator - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
curChar - Variable in class org.dllearner.parser.KBParserTokenManager
 
curChar - Variable in class org.dllearner.parser.PrologParserTokenManager
 
currentlyBestAxioms - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
currentToken - Variable in exception org.dllearner.parser.ParseException
This is the last token that has been consumed successfully.
CustomHierarchyRefinementOperator - Interface in org.dllearner.refinementoperators
A refinement operator for which hierarchies other those of the reasoner can be injected.
CustomStartRefinementOperator - Interface in org.dllearner.refinementoperators
A refinement operator, which allows to set a start class.

D

data - Variable in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
data - Variable in class org.dllearner.core.ref.SearchTreeNodeSimple
 
Data - Class in org.dllearner.kb.repository.bioportal
 
Data() - Constructor for class org.dllearner.kb.repository.bioportal.Data
 
dataAllValuesLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataCardinalityLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataComplementLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataFactory - Variable in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
dataFactory - Variable in class org.dllearner.core.AbstractCELA
 
dataFactory - Variable in class org.dllearner.core.AbstractClassExpressionLearningProblem
 
dataFactory - Variable in class org.dllearner.core.ref.ClassExpressionRefinementOperatorBase
 
dataFactory - Variable in class org.dllearner.utilities.FuzzyOwl2
 
dataFactory - Variable in class org.dllearner.utilities.split.AbstractValuesSplitter
 
dataHasValueLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataIntersectionLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataOneOfLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataproperty2datatype - Variable in class org.dllearner.core.AbstractReasonerComponent
 
DataPropertyAxiomLearner<T extends org.semanticweb.owlapi.model.OWLDataPropertyAxiom> - Class in org.dllearner.algorithms.properties
A learning algorithm for data property axioms.
DataPropertyAxiomLearner() - Constructor for class org.dllearner.algorithms.properties.DataPropertyAxiomLearner
 
DataPropertyDomainAxiomLearner - Class in org.dllearner.algorithms.properties
 
DataPropertyDomainAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.DataPropertyDomainAxiomLearner
 
DataPropertyHierarchyAxiomLearner<T extends org.semanticweb.owlapi.model.OWLDataPropertyAxiom> - Class in org.dllearner.algorithms.properties
A learning algorithm for data property hierarchy axioms.
DataPropertyHierarchyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.DataPropertyHierarchyAxiomLearner
 
DataPropertyRangeAxiomLearner - Class in org.dllearner.algorithms.properties
 
DataPropertyRangeAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.DataPropertyRangeAxiomLearner
 
dataProperyLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dataRange - Variable in class org.dllearner.algorithms.el.ELDescriptionNode
 
dataSomeValuesLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
datatype2Properties - Variable in class org.dllearner.core.AbstractReasonerComponent
 
datatypeLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
DatatypeProperty() - Method in class org.dllearner.parser.KBParser
 
DatatypePropertyDomainAxiom() - Method in class org.dllearner.parser.KBParser
 
datatypePropertyHierarchy - Variable in class org.dllearner.core.AbstractReasonerComponent
 
DatatypePropertyHierarchy - Class in org.dllearner.core.owl
Represents a hierarchy of datatype properties.
DatatypePropertyHierarchy(SortedMap<OWLDataProperty, SortedSet<OWLDataProperty>>, SortedMap<OWLDataProperty, SortedSet<OWLDataProperty>>) - Constructor for class org.dllearner.core.owl.DatatypePropertyHierarchy
 
DatatypePropertyNode - Class in org.dllearner.kb.extraction
Property node, has connection to a and b part
DatatypePropertyNode(String, Node, LiteralNode) - Constructor for class org.dllearner.kb.extraction.DatatypePropertyNode
 
DatatypePropertyRangeAxiom() - Method in class org.dllearner.parser.KBParser
 
dataUnionLength - Variable in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
dateTimeFormatters - Static variable in class org.dllearner.utilities.OWLAPIUtils
 
dateTimeParsers - Static variable in class org.dllearner.utilities.OWLAPIUtils
 
DBPediaNavigatorCityLocatorRule - Class in org.dllearner.kb.manipulator
 
DBPediaNavigatorCityLocatorRule(Rule.Months) - Constructor for class org.dllearner.kb.manipulator.DBPediaNavigatorCityLocatorRule
 
DBpediaNavigatorFilterRule - Class in org.dllearner.kb.manipulator
 
DBpediaNavigatorFilterRule(Rule.Months) - Constructor for class org.dllearner.kb.manipulator.DBpediaNavigatorFilterRule
 
DBpediaNavigatorOtherRule - Class in org.dllearner.kb.manipulator
 
DBpediaNavigatorOtherRule(Rule.Months) - Constructor for class org.dllearner.kb.manipulator.DBpediaNavigatorOtherRule
 
debug - Static variable in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree
turns on logging
debug - Static variable in class org.dllearner.utilities.Files
 
debugStream - Variable in class org.dllearner.parser.KBParserTokenManager
Debug output.
debugStream - Variable in class org.dllearner.parser.PrologParserTokenManager
Debug output.
DEBUGTAIL - Static variable in class org.dllearner.kb.extraction.Node
 
declared - Variable in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
DEFAULT - Static variable in interface org.dllearner.parser.KBParserConstants
Lexical state.
DEFAULT - Static variable in interface org.dllearner.parser.PrologParserConstants
Lexical state.
DEFAULT_AUTHOR_SLOT - Static variable in class org.dllearner.kb.repository.bioportal.OntologyBean
 
DEFAULT_DEFINITION_SLOT - Static variable in class org.dllearner.kb.repository.bioportal.OntologyBean
 
DEFAULT_LITERAL_NODE - Static variable in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
DEFAULT_PREFERRED_NAME_SLOT - Static variable in class org.dllearner.kb.repository.bioportal.OntologyBean
 
DEFAULT_RULES - Static variable in class org.dllearner.reasoning.SKOSReasoner
Constant: used to indicate default SKOS processing level
DEFAULT_SYNONYM_SLOT - Static variable in class org.dllearner.kb.repository.bioportal.OntologyBean
 
DEFAULT_VAR_NODE - Static variable in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
DefaultDateTimeValuesSplitter - Class in org.dllearner.utilities.split
A splitter for date time values which simply returns a fixed number of split values.
DefaultDateTimeValuesSplitter(AbstractReasonerComponent, OWLDataFactory, int) - Constructor for class org.dllearner.utilities.split.DefaultDateTimeValuesSplitter
 
defaultGraph - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
DefaultNumericValuesSplitter - Class in org.dllearner.utilities.split
A splitter for numeric values which simply returns a fixed number of split values.
DefaultNumericValuesSplitter(AbstractReasonerComponent, OWLDataFactory, int) - Constructor for class org.dllearner.utilities.split.DefaultNumericValuesSplitter
 
DefaultNumericValuesSplitter(AbstractReasonerComponent, OWLDataFactory) - Constructor for class org.dllearner.utilities.split.DefaultNumericValuesSplitter
 
definedConcepts - Variable in class org.dllearner.utilities.FuzzyOwl2
 
definedProperties - Variable in class org.dllearner.utilities.FuzzyOwl2
 
deleteFile(String) - Static method in class org.dllearner.utilities.Files
 
deleteFile(File) - Static method in class org.dllearner.utilities.Files
 
DeleteSuggestion - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
deriveDefinition(DSTDLTree, boolean) - Static method in class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
Return a concept definition from a DSTDLTree (both the positive and the negative instances) A theoretical problems concerns the way in which BBAs must be considered.
deriveDefinition(DLTree, boolean) - Static method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
Return a concept definition from a DLTree (both the positive and the negative instances)
deriveDefinition(DLTree) - Method in class org.dllearner.algorithms.decisiontrees.tdt.TDTClassifier
Procedure for deriving a concept description from a TDT classifier
descendingIterator() - Method in class org.dllearner.utilities.datastructures.AbstractSearchTree
 
descendingSet() - Method in class org.dllearner.utilities.datastructures.AbstractSearchTree
 
description - Variable in class org.dllearner.algorithms.celoe.OENode
 
DescriptionSubsumptionTree - Class in org.dllearner.utilities.datastructures
This class takes Descritptions and a reasoner and orders the descriptions by subsumption into a tree, represented by the internal class "Node"
DescriptionSubsumptionTree(AbstractReasonerComponent) - Constructor for class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree
 
DescriptionSubsumptionTree.Node - Class in org.dllearner.utilities.datastructures
Datastructure for the tree
descriptionToString(OWLClassExpression) - Method in class org.dllearner.core.AbstractCELA
 
deSerialize(File) - Static method in class org.dllearner.utilities.statistics.TableColumn
 
df - Static variable in class org.dllearner.algorithms.el.ELDescriptionNode
 
df - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
df - Variable in class org.dllearner.core.AbstractReasonerComponent
 
df - Variable in class org.dllearner.refinementoperators.RefinementOperatorAdapter
 
dfPercent - Variable in class org.dllearner.core.AbstractCELA
 
dfPercent - Static variable in class org.dllearner.core.EvaluatedHypothesis
 
difference(Set<String>, OntModel) - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
DIGIT - Static variable in interface org.dllearner.parser.PrologParserConstants
RegularExpression Id.
directory - Variable in class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
disable_tracing() - Method in class org.dllearner.parser.KBParser
Disable tracing.
disable_tracing() - Method in class org.dllearner.parser.PrologParser
Disable tracing.
disambiguateBlankNodes(String, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.aquisitors.SparqlTupleAquisitor
 
disambiguateBlankNodes(String, SortedSet<RDFNodeTuple>) - Method in class org.dllearner.kb.aquisitors.TupleAquisitor
 
DisjointClassesLearner - Class in org.dllearner.algorithms
Learns disjoint classes using SPARQL queries.
DisjointClassesLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.DisjointClassesLearner
 
DisjointDataPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
DisjointDataPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.DisjointDataPropertyAxiomLearner
 
DisjointObjectPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
DisjointObjectPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.DisjointObjectPropertyAxiomLearner
 
DisjunctiveCELA - Class in org.dllearner.algorithms.meta
A meta algorithm that combines the (partial) solutions of multiple calls of the base class learning algorithm LA into a disjunction.
DisjunctiveCELA(AbstractCELA) - Constructor for class org.dllearner.algorithms.meta.DisjunctiveCELA
 
DisjunctiveHeuristic - Class in org.dllearner.algorithms.el
 
DisjunctiveHeuristic() - Constructor for class org.dllearner.algorithms.el.DisjunctiveHeuristic
 
dispose() - Method in class org.dllearner.algorithms.pattern.FullIRIEntityShortFromProvider
 
dispose() - Method in class org.dllearner.kb.repository.lov.LOVRepository
 
dispose() - Method in class org.dllearner.kb.repository.oxford.OxfordRepository
 
dispose() - Method in class org.dllearner.kb.repository.tones.TONESRepository
 
dispose() - Method in class org.dllearner.utilities.LabelShortFormProvider
 
dissolveBlankNodes - Variable in class org.dllearner.kb.aquisitors.TupleAquisitor
 
distanceFrom(QueryTreePoint) - Method in class org.dllearner.algorithms.qtl.util.QueryTreePoint
 
DISTINCT_OBJECTS_COUNT_QUERY - Static variable in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
DISTINCT_SUBJECTS_COUNT_QUERY - Static variable in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
divideOrZero(int, int) - Static method in class org.dllearner.learningproblems.Heuristics
 
DLLearnerException - Exception in org.dllearner.exceptions
An exception thrown by the DL-Learner framework.
DLLearnerException(String) - Constructor for exception org.dllearner.exceptions.DLLearnerException
 
DLLearnerException(Throwable) - Constructor for exception org.dllearner.exceptions.DLLearnerException
 
DLSyntaxObjectRenderer - Class in org.dllearner.utilities.owl
Extended version of the DLSyntaxObjectRenderer class in OWL API.
DLSyntaxObjectRenderer() - Constructor for class org.dllearner.utilities.owl.DLSyntaxObjectRenderer
 
DLTree - Class in org.dllearner.algorithms.decisiontrees.tdt.model
 
DLTree() - Constructor for class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
DLTree(OWLClassExpression) - Constructor for class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
DLTreesRefinementOperator - Class in org.dllearner.algorithms.decisiontrees.refinementoperators
The original refinement Operator proposed for inducing Terminological Decision Trees
DLTreesRefinementOperator() - Constructor for class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
DLTreesRefinementOperator(PosNegLP, AbstractReasonerComponent, int) - Constructor for class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
domain - Variable in class org.dllearner.core.owl.FlatABox
 
Done() - Method in class org.dllearner.parser.SimpleCharStream
Reset buffer when finished.
Double() - Method in class org.dllearner.parser.KBParser
 
DOUBLE - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
DOUBLE - Static variable in interface org.dllearner.parser.PrologParserConstants
RegularExpression Id.
DOUBLE - Static variable in class org.dllearner.utilities.JamonMonitorLogger
 
doubleRetrieval(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
doubleRetrieval(OWLClassExpression) - Method in interface org.dllearner.core.IndividualReasoner
Performs a query for all instances of the given class expression and its negation.
doubleRetrievalImpl(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
doubleRetrievalImpl(OWLClassExpression) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
doubleRound(double, int, String, String) - Static method in class org.dllearner.utilities.StringFormatter
 
doubleToPercent(double) - Static method in class org.dllearner.utilities.StringFormatter
formats a double value between 0 and 100 to a percentage ex: 0.7854684 will be return 78.5%
doubleToPercent(double, int) - Static method in class org.dllearner.utilities.StringFormatter
 
doubleToPercent(double, int, boolean) - Static method in class org.dllearner.utilities.StringFormatter
 
downloadFile(URL) - Method in class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
Download the file such that later on we can load it from the local file system.
DSTDLTree - Class in org.dllearner.algorithms.decisiontrees.dsttdt.models
 
DSTDLTree() - Constructor for class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
 
DSTDLTree(OWLClassExpression, MassFunction) - Constructor for class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
 
DSTTDTClassifier - Class in org.dllearner.algorithms.decisiontrees.dsttdt
 
DSTTDTClassifier() - Constructor for class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
DSTTDTClassifier(AbstractClassExpressionLearningProblem, AbstractReasonerComponent) - Constructor for class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
DSTUtils - Class in org.dllearner.algorithms.decisiontrees.dsttdt.dst
Utility for building MassFunction (for now the method supports only a binary frame of discernment)
DSTUtils() - Constructor for class org.dllearner.algorithms.decisiontrees.dsttdt.dst.DSTUtils
 
dtDatatypes - Static variable in class org.dllearner.utilities.OWLAPIUtils
 
dump() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
dump(PrintWriter) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
dump(PrintWriter, int) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
dump() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
dump(PrintWriter) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
dump(PrintWriter, int) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
dumpClassHierarchy(boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
dumpDataPropertyHierarchy(boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
dumpObjectPropertyHierarchy(boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
duplicator - Variable in class org.dllearner.core.AbstractCELA
 

E

Edge - Class in org.dllearner.algorithms.qtl.datastructures.rendering
 
Edge(long, String) - Constructor for class org.dllearner.algorithms.qtl.datastructures.rendering.Edge
 
edges - Variable in class org.dllearner.algorithms.el.ELDescriptionNode
 
ELDescriptionEdge - Class in org.dllearner.algorithms.el
A (directed) edge in an EL OWLClassExpression tree.
ELDescriptionEdge(OWLProperty, ELDescriptionNode) - Constructor for class org.dllearner.algorithms.el.ELDescriptionEdge
Constructs and edge given a label and an EL OWLClassExpression tree.
ELDescriptionEdgeComparator - Class in org.dllearner.algorithms.el
 
ELDescriptionEdgeComparator() - Constructor for class org.dllearner.algorithms.el.ELDescriptionEdgeComparator
 
ELDescriptionNode - Class in org.dllearner.algorithms.el
Represents an EL OWLClassExpression tree, which corresponds to a OWLClassExpression in the EL OWLClassExpression logic.
ELDescriptionNode() - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
Internal constructor used for cloning nodes.
ELDescriptionNode(ELDescriptionTree) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
Constructs an EL OWLClassExpression tree with empty root label.
ELDescriptionNode(ELDescriptionTree, OWLClass...) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
 
ELDescriptionNode(ELDescriptionTree, TreeSet<OWLClass>) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
Constructs an EL OWLClassExpression tree given its root label.
ELDescriptionNode(ELDescriptionTree, OWLDataRange) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
Constructs an EL description tree node given a description tree and the data range.
ELDescriptionNode(ELDescriptionNode, OWLProperty, OWLClass...) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
 
ELDescriptionNode(ELDescriptionNode, OWLProperty, Set<OWLClass>) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
 
ELDescriptionNode(ELDescriptionNode, OWLProperty, OWLDataRange) - Constructor for class org.dllearner.algorithms.el.ELDescriptionNode
 
ELDescriptionNodeComparator - Class in org.dllearner.algorithms.el
Compares two EL OWLClassExpression trees.
ELDescriptionNodeComparator() - Constructor for class org.dllearner.algorithms.el.ELDescriptionNodeComparator
 
ELDescriptionTree - Class in org.dllearner.algorithms.el
Represents an EL OWLClassExpression tree.
ELDescriptionTree(AbstractReasonerComponent) - Constructor for class org.dllearner.algorithms.el.ELDescriptionTree
 
ELDescriptionTree(AbstractReasonerComponent, OWLClassExpression) - Constructor for class org.dllearner.algorithms.el.ELDescriptionTree
Constructs an EL OWLClassExpression tree from an EL description.
ELDescriptionTreeComparator - Class in org.dllearner.algorithms.el
Compares two EL OWLClassExpression trees by calling ELDescriptionNodeComparator on their root nodes.
ELDescriptionTreeComparator() - Constructor for class org.dllearner.algorithms.el.ELDescriptionTreeComparator
 
ELDown - Class in org.dllearner.refinementoperators
EL downward refinement operator constructed by Jens Lehmann and Christoph Haase.
ELDown(AbstractReasonerComponent) - Constructor for class org.dllearner.refinementoperators.ELDown
 
ELDown(AbstractReasonerComponent, boolean) - Constructor for class org.dllearner.refinementoperators.ELDown
 
ELDown(AbstractReasonerComponent, boolean, ClassHierarchy, ObjectPropertyHierarchy, DatatypePropertyHierarchy) - Constructor for class org.dllearner.refinementoperators.ELDown
 
ELHeuristic - Interface in org.dllearner.algorithms.el
Marker interface for heuristics in the EL learning algorithms.
ELLearningAlgorithm - Class in org.dllearner.algorithms.el
A learning algorithm for EL, which is based on an ideal refinement operator.
ELLearningAlgorithm() - Constructor for class org.dllearner.algorithms.el.ELLearningAlgorithm
 
ELLearningAlgorithm(AbstractClassExpressionLearningProblem, AbstractReasonerComponent) - Constructor for class org.dllearner.algorithms.el.ELLearningAlgorithm
 
ELLearningAlgorithmDisjunctive - Class in org.dllearner.algorithms.el
A learning algorithm for EL, which will based on an ideal refinement operator.
ELLearningAlgorithmDisjunctive() - Constructor for class org.dllearner.algorithms.el.ELLearningAlgorithmDisjunctive
 
ELLearningAlgorithmDisjunctive(AbstractClassExpressionLearningProblem, AbstractReasonerComponent) - Constructor for class org.dllearner.algorithms.el.ELLearningAlgorithmDisjunctive
 
EMPTY_QUERY_TREE_QUERY - Static variable in class org.dllearner.algorithms.qtl.QueryTreeUtils
 
EmptyLGGException - Exception in org.dllearner.algorithms.qtl.exception
 
EmptyLGGException() - Constructor for exception org.dllearner.algorithms.qtl.exception.EmptyLGGException
 
enable_tracing() - Method in class org.dllearner.parser.KBParser
Enable tracing.
enable_tracing() - Method in class org.dllearner.parser.PrologParser
Enable tracing.
encode(String) - Static method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryBase
 
encode(String) - Static method in class org.dllearner.utilities.URLencodeUTF8
 
endColumn - Variable in class org.dllearner.parser.Token
The column number of the last character of this Token.
endLine - Variable in class org.dllearner.parser.Token
The line number of the last character of this Token.
EnrichmentVocabulary - Class in org.dllearner.utilities
 
EnrichmentVocabulary() - Constructor for class org.dllearner.utilities.EnrichmentVocabulary
 
entailment - Variable in class org.dllearner.algorithms.qtl.operations.lgg.LGGGeneratorRDFS
 
Entailment - Enum in org.dllearner.algorithms.qtl.util
 
entities - Variable in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
 
EntityDependencyMatrix<T> - Class in org.dllearner.algorithms.schema
 
entityToDescribe - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
entityTypes - Variable in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
 
EOF - Static variable in interface org.dllearner.parser.KBParserConstants
End of File.
EOF - Static variable in interface org.dllearner.parser.PrologParserConstants
End of File.
eol - Variable in exception org.dllearner.parser.ParseException
The end of line string for this machine.
equals(Object) - Method in class org.dllearner.algorithms.ocel.FlexibleHeuristic
 
equals(Object) - Method in class org.dllearner.algorithms.ocel.LexicographicHeuristic
 
equals(Object) - Method in class org.dllearner.algorithms.ocel.NodeComparatorStable
 
equals(V) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
equals(Object) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeChange
 
equals(RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
equals(Object) - Method in class org.dllearner.algorithms.qtl.datastructures.NodeInv
 
equals(Object) - Method in class org.dllearner.algorithms.qtl.datastructures.rendering.Edge
 
equals(Object) - Method in class org.dllearner.algorithms.qtl.datastructures.rendering.Vertex
 
equals(Object) - Method in class org.dllearner.algorithms.qtl.util.SPARQLEndpointEx
 
equals(Object) - Method in class org.dllearner.core.owl.fuzzydll.FuzzyIndividual
 
equals(Object) - Method in class org.dllearner.core.owl.OWLNaryBooleanClassExpressionImplExt
 
equals(Object) - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
equals(Object) - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
equals(Object) - Method in class org.dllearner.kb.sparql.SparqlEndpoint
 
equals(Object) - Method in class org.dllearner.prolog.Atom
 
equals(Object) - Method in class org.dllearner.prolog.Function
 
equals(Object) - Method in class org.dllearner.prolog.FunctionDefinition
 
equals(Object) - Method in class org.dllearner.prolog.List
 
equals(Object) - Method in class org.dllearner.prolog.Literal
 
equals(Object) - Method in class org.dllearner.prolog.Number
 
equals(Object) - Method in class org.dllearner.prolog.PredicateDefinition
 
equals(Object) - Method in class org.dllearner.prolog.PrologConstant
 
equals(Object) - Method in class org.dllearner.prolog.StringConstant
 
equals(Object) - Method in class org.dllearner.prolog.Term
 
equals(Object) - Method in class org.dllearner.prolog.Variable
 
equals(DescriptionSubsumptionTree.Node) - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
== is used, important, when removing nodes from subClasses SortedSet
equals(RDFNodeTuple) - Method in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
equals(StringTuple) - Method in class org.dllearner.utilities.datastructures.StringTuple
 
EquivalentDataPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
EquivalentDataPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.EquivalentDataPropertyAxiomLearner
 
EquivalentObjectPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
EquivalentObjectPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.EquivalentObjectPropertyAxiomLearner
 
equivalents - Variable in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
holds descriptions of nodes with equivalent classes should be ordered by length
errorSubdirectory - Variable in class org.dllearner.kb.dataset.AbstractOWLOntologyDataset
 
evalCache - Variable in class org.dllearner.algorithms.hybridgp.Psi
 
evaluate(V) - Method in class org.dllearner.core.AbstractLearningProblem
Evaluates the hypothesis by computing the score and returning an evaluated hypothesis of the correct type (ClassLearningProblem returns EvaluatedDescriptionClass instead of generic EvaluatedDescription).
evaluate(V, double) - Method in class org.dllearner.core.AbstractLearningProblem
Evaluates the hypothesis by computing the score and returning an evaluated hypothesis of the correct type (ClassLearningProblem returns EvaluatedDescriptionClass instead of generic EvaluatedDescription).
evaluate(OWLClassExpression) - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
evaluate(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
evaluate(OWLClassExpression) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
evaluate(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosNegLPStandard
 
evaluate(OWLClassExpression) - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
evaluate(OWLClassExpression) - Method in class org.dllearner.learningproblems.PosNegUndLP
 
evaluate(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosOnlyLP
 
EvaluatedAxiom<T extends org.semanticweb.owlapi.model.OWLAxiom> - Class in org.dllearner.core
 
EvaluatedAxiom(T, AxiomScore) - Constructor for class org.dllearner.core.EvaluatedAxiom
 
EvaluatedAxiom(T, AxiomScore, boolean) - Constructor for class org.dllearner.core.EvaluatedAxiom
 
EvaluatedDescription<S extends Score> - Class in org.dllearner.core
An evaluated class expression is a class expression and its score (with some convenience method and serialisation formats).
EvaluatedDescription(OWLClassExpression, S) - Constructor for class org.dllearner.core.EvaluatedDescription
Constructs an evaluated class expression using its score.
EvaluatedDescriptionClass - Class in org.dllearner.learningproblems
An evaluated OWLClassExpression for learning classes in ontologies.
EvaluatedDescriptionClass(OWLClassExpression, ClassScore) - Constructor for class org.dllearner.learningproblems.EvaluatedDescriptionClass
Constructs an evaluated class expression for learning classes in ontologies.
EvaluatedDescriptionComparator - Class in org.dllearner.utilities.owl
Comparator for evaluated descriptions, which orders them by accuracy as first criterion, length as second criterion, and syntactic structure as third criterion.
EvaluatedDescriptionComparator() - Constructor for class org.dllearner.utilities.owl.EvaluatedDescriptionComparator
 
EvaluatedDescriptionPosNeg - Class in org.dllearner.learningproblems
This represents a class description, which has been evaluated by the learning algorithm, i.e.
EvaluatedDescriptionPosNeg(OWLClassExpression, ScorePosNeg) - Constructor for class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
Constructs an evaluated description using its score.
EvaluatedDescriptionPosNegComparator - Class in org.dllearner.utilities.owl
Comparator for evaluated descriptions, which orders them by accuracy as first criterion, length as second criterion, and syntactic structure as third criterion.
EvaluatedDescriptionPosNegComparator() - Constructor for class org.dllearner.utilities.owl.EvaluatedDescriptionPosNegComparator
 
EvaluatedDescriptionPosOnly - Class in org.dllearner.learningproblems
 
EvaluatedDescriptionPosOnly(OWLClassExpression, ScorePosOnly) - Constructor for class org.dllearner.learningproblems.EvaluatedDescriptionPosOnly
 
EvaluatedDescriptionSet - Class in org.dllearner.utilities.owl
A set of evaluated descriptions, which is bound by a maximum size.
EvaluatedDescriptionSet(int) - Constructor for class org.dllearner.utilities.owl.EvaluatedDescriptionSet
 
EvaluatedHypothesis<T extends org.semanticweb.owlapi.model.OWLObject,S extends Score> - Class in org.dllearner.core
An evaluated hypothesis is a hypothesis and its score.
EvaluatedHypothesis(T, S) - Constructor for class org.dllearner.core.EvaluatedHypothesis
Constructs an evaluated hypothesis using its score.
EvaluatedQueryTree<N> - Class in org.dllearner.algorithms.qtl.operations.lgg
 
EvaluatedQueryTree(QueryTree<N>, Collection<QueryTree<N>>, Collection<QueryTree<N>>, QueryTreeScore) - Constructor for class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
EvaluatedQueryTree(int, QueryTree<N>, Collection<QueryTree<N>>, Collection<QueryTree<N>>, QueryTreeScore) - Constructor for class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
EvaluatedRDFResourceTree - Class in org.dllearner.algorithms.qtl.datastructures.impl
 
EvaluatedRDFResourceTree(RDFResourceTree, Collection<RDFResourceTree>, Collection<RDFResourceTree>, QueryTreeScore) - Constructor for class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
EvaluatedRDFResourceTree(int, RDFResourceTree, Collection<RDFResourceTree>, Collection<RDFResourceTree>, QueryTreeScore) - Constructor for class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
EvaluationCache - Class in org.dllearner.learningproblems
Caches results of previous concept evaluation to speed up further evaluations.
EvaluationCache(SortedSet<OWLIndividual>) - Constructor for class org.dllearner.learningproblems.EvaluationCache
 
EvidentialModel - Interface in org.dllearner.algorithms.decisiontrees.dsttdt.models
 
ExactMatchFilter - Class in org.dllearner.algorithms.qtl.filters
 
ExactMatchFilter(Set<String>) - Constructor for class org.dllearner.algorithms.qtl.filters.ExactMatchFilter
 
ExampleBasedHeuristic - Interface in org.dllearner.algorithms.ocel
Marker interface for heuristics in the refinement operator based learning approach.
ExampleBasedNode - Class in org.dllearner.algorithms.ocel
Represents a node in the search tree.
ExampleBasedNode(OWLClassExpression, AbstractCELA) - Constructor for class org.dllearner.algorithms.ocel.ExampleBasedNode
 
ExampleBasedNode.QualityEvaluationMethod - Enum in org.dllearner.algorithms.ocel
 
exampleConceptsNeg - Variable in class org.dllearner.core.owl.FlatABox
 
exampleConceptsPos - Variable in class org.dllearner.core.owl.FlatABox
 
ExampleContainer - Class in org.dllearner.utilities.examples
A simple container for storing pos and negexamples, basically a more simple parameter or return value.
ExampleContainer(SortedSet<OWLIndividual>, SortedSet<OWLIndividual>) - Constructor for class org.dllearner.utilities.examples.ExampleContainer
 
ExampleDataCollector - Class in org.dllearner.utilities.examples
Creates a temporary file with all the data collected for examples.
ExampleDataCollector(String, SortedSet<String>, List<File>) - Constructor for class org.dllearner.utilities.examples.ExampleDataCollector
 
ExampleLoader - Class in org.dllearner.learningproblems
Load positive and negative examples from Class Expression
ExampleLoader() - Constructor for class org.dllearner.learningproblems.ExampleLoader
 
exampleLoaderHelper - Variable in class org.dllearner.core.AbstractClassExpressionLearningProblem
 
executeAskQuery(String) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
executeAskQuery(String) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
executeConstructQuery(String) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
executeConstructQuery(SparqlEndpoint, String) - Method in class org.dllearner.kb.sparql.ExtractionDBCache
 
executeConstructQuery(SparqlEndpoint, String, int) - Method in class org.dllearner.kb.sparql.ExtractionDBCache
 
executeQuery(String, String, OntModel, String) - Method in class org.dllearner.kb.sparql.simple.QueryExecutor
 
executeSelectQuery(String) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
executeSelectQuery(String, Model) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
executeSelectQuery(SparqlEndpoint, String) - Method in class org.dllearner.kb.sparql.ExtractionDBCache
 
executeSelectQuery(SparqlEndpoint, String, int) - Method in class org.dllearner.kb.sparql.ExtractionDBCache
 
executeSelectQuery(String, long, TimeUnit) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
executeSelectQuery(String) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
executeSparqlAskQuery(SparqlQuery) - Method in class org.dllearner.kb.sparql.Cache
 
executeSparqlQuery(SparqlQuery) - Method in class org.dllearner.kb.sparql.Cache
Takes a SPARQL query (which has not been evaluated yet) as argument and returns a JSON result set.
ExistentialRestrictionMaterialization - Class in org.dllearner.reasoning
Materialize the existential restrictions, i.e.
ExistentialRestrictionMaterialization(OWLOntology) - Constructor for class org.dllearner.reasoning.ExistentialRestrictionMaterialization
 
existingAxioms - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
existingAxiomsTemplate - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
Exists() - Method in class org.dllearner.parser.KBParser
 
EXISTS - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
exit(String) - Static method in class org.dllearner.utilities.FuzzyOwl2
Prints an error message in the standard output and finishes the execution.
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.BlankNode
 
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.ClassNode
 
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.DatatypePropertyNode
 
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.InstanceNode
 
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.LiteralNode
 
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.Node
Nodes are expanded with a certain context, given by the typedSparqlQuery and the manipulator
expand(TupleAquisitor, Manipulator) - Method in class org.dllearner.kb.extraction.ObjectPropertyNode
 
ExpandBuff(boolean) - Method in class org.dllearner.parser.SimpleCharStream
 
expanded - Variable in class org.dllearner.kb.extraction.Node
 
expandNode(String, TupleAquisitor) - Method in class org.dllearner.kb.extraction.ExtractionAlgorithm
most important function expands one example CAVE: the recursion is not a recursion anymore, it was transformed to an iteration
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.BlankNode
 
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.ClassNode
 
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.DatatypePropertyNode
 
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.InstanceNode
 
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.LiteralNode
 
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.Node
gets type defs for properties like rdf:type SymmetricProperties
expandProperties(TupleAquisitor, Manipulator, boolean) - Method in class org.dllearner.kb.extraction.ObjectPropertyNode
 
expectedTokenSequences - Variable in exception org.dllearner.parser.ParseException
Each entry in this array is an array of integers.
explainScore(EvaluatedAxiom<T>) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
explanation - Static variable in class org.dllearner.utilities.EnrichmentVocabulary
 
exportAsGraph(Query, File) - Static method in class org.dllearner.utilities.QueryUtils
 
extendLabel(OWLClass) - Method in class org.dllearner.algorithms.el.ELDescriptionNode
Adds an entry to the node label.
extendSimulation(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
extendSimulationSC1(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
extendSimulationSC12(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
extendSimulationSC2(ELDescriptionNode, ELDescriptionNode) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
extract(Set<String>) - Method in class org.dllearner.kb.extraction.Manager
 
extractFragment(OWLClass, int) - Method in interface org.dllearner.algorithms.pattern.FragmentExtractor
Extracts a fragment of the knowledge base for the given class C with a max.
extractFragment(OWLClass, int) - Method in class org.dllearner.algorithms.pattern.IndividualBasedFragmentExtractor
 
extractFragment(OWLClass, int) - Method in class org.dllearner.algorithms.pattern.TimeBasedFragmentExtractor
 
extractIncomingTriplePatterns(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
Returns all triple patterns in given SPARQL query that have the given node in object position, i.e.
extractIncomingTriplePatternsForProjectionVars(Query) - Method in class org.dllearner.utilities.QueryUtils
Returns triple patterns for each projection variable v such that v is in subject position.
extractIncomingTriplePatternsTrans(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
 
extractIngoingTriplePatternsForProjectionVars(Query) - Method in class org.dllearner.utilities.QueryUtils
Returns triple patterns for each projection variable v such that v is in object position.
ExtractionAlgorithm - Class in org.dllearner.kb.extraction
This class is used to extract the information .
ExtractionAlgorithm(Configuration) - Constructor for class org.dllearner.kb.extraction.ExtractionAlgorithm
 
ExtractionDBCache - Class in org.dllearner.kb.sparql
The class is used to cache information about resources to a database.
ExtractionDBCache(Connection) - Constructor for class org.dllearner.kb.sparql.ExtractionDBCache
 
ExtractionDBCache(String) - Constructor for class org.dllearner.kb.sparql.ExtractionDBCache
 
extractionStrategy - Static variable in class org.dllearner.algorithms.pattern.IndividualBasedFragmentExtractor
 
extractionStrategy - Static variable in class org.dllearner.algorithms.pattern.TimeBasedFragmentExtractor
 
extractNonOptionalTriplePatterns(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
Returns all triple patterns in given SPARQL query that have the given node either in subject or in object position, i.e.
extractOutgoingTriplePatterns(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
Returns all triple patterns in given SPARQL query that have the given node in subject position, i.e.
extractOutgoingTriplePatternsForProjectionVars(Query) - Method in class org.dllearner.utilities.QueryUtils
Returns triple patterns for each projection variable v such that v is in subject position.
extractOutgoingTriplePatternsTrans(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
 
extractParallel() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
extractTriplePattern(Query) - Method in class org.dllearner.utilities.QueryUtils
 
extractTriplePattern(Query, boolean) - Method in class org.dllearner.utilities.QueryUtils
 
extractTriplePattern(ElementGroup) - Method in class org.dllearner.utilities.QueryUtils
 
extractTriplePattern(ElementGroup, boolean) - Method in class org.dllearner.utilities.QueryUtils
 
extractTriplePatterns(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
Returns all triple patterns in given SPARQL query that have the given node either in subject or in object position, i.e.
extractTriplePatternsForProjectionVars(Query) - Method in class org.dllearner.utilities.QueryUtils
Returns triple patterns for each projection variable v such that v is either in subject or object position.
extractTriplePatternsWithPredicate(Query, Node) - Method in class org.dllearner.utilities.QueryUtils
Returns all triple patterns in given SPARQL query that contain the given predicate.
extractValueFromSingleton(List<T>) - Static method in class org.dllearner.algorithms.decisiontrees.utils.SetUtils
 

F

factory - Static variable in class org.dllearner.utilities.OWLAPIUtils
 
falseCount - Variable in class org.dllearner.utilities.ReasoningUtils.CoverageCount
 
falseSet - Variable in class org.dllearner.utilities.ReasoningUtils.Coverage
 
falseSet - Variable in class org.dllearner.utilities.ReasoningUtils.Coverage3
 
Files - Class in org.dllearner.utilities
 
Files() - Constructor for class org.dllearner.utilities.Files
 
FillBuff() - Method in class org.dllearner.parser.SimpleCharStream
 
fillDepthFirst() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
fillDepthFirst() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
Filter - Interface in org.dllearner.algorithms.qtl.filters
 
filterOutGeneralTypes(QueryExecutionFactory, Query) - Method in class org.dllearner.utilities.QueryUtils
Removes triple patterns of form (s rdf:type A) if there exists a triple pattern (s rdf:type B) such that the underlying knowledge base entails (B rdfs:subClassOf A).
Filters - Class in org.dllearner.algorithms.qtl.filters
 
Filters() - Constructor for class org.dllearner.algorithms.qtl.filters.Filters
 
FilterVisitor - Class in org.dllearner.algorithms.qtl.operations
 
FilterVisitor() - Constructor for class org.dllearner.algorithms.qtl.operations.FilterVisitor
 
find(List<T>, List<List<T>>) - Static method in class org.dllearner.algorithms.decisiontrees.utils.SetUtils
Find an element in a power set
find(List<T>, List<T>[]) - Static method in class org.dllearner.algorithms.decisiontrees.utils.SetUtils
 
findCombinations(Collection) - Static method in class org.dllearner.algorithms.decisiontrees.utils.Combination
Liefert eine Liste aller Kombinationen (ohne Duplikate) der Elemente der angegebenen Liste.
findCombinations(Collection<T>, int) - Static method in class org.dllearner.algorithms.decisiontrees.utils.Combination
Liefert eine Liste aller Kombinationen (ohne Duplikate) der Elemente der angegebenen Liste, die eine bestimmte Anzahl umfasst.
fixedDatatypes - Static variable in class org.dllearner.utilities.OWLAPIUtils
 
FlatABox - Class in org.dllearner.core.owl
A flat ABox can be used to store knowledge of a completely dematerialised knowledge base.
FlatABox() - Constructor for class org.dllearner.core.owl.FlatABox
 
FleissKappa - Class in org.dllearner.utilities.statistics
Computes the Fleiss' Kappa value as described in (Fleiss, 1971).
FleissKappa() - Constructor for class org.dllearner.utilities.statistics.FleissKappa
 
FlexibleHeuristic - Class in org.dllearner.algorithms.ocel
This heuristic compares two nodes by computing a score using the number of covered negatives and the horizontal expansion factor of a node as input.
FlexibleHeuristic(int, double) - Constructor for class org.dllearner.algorithms.ocel.FlexibleHeuristic
 
FlexibleHeuristic() - Constructor for class org.dllearner.algorithms.ocel.FlexibleHeuristic
 
floatDatatypes - Static variable in class org.dllearner.utilities.OWLAPIUtils
 
flush() - Method in class org.dllearner.algorithms.pattern.AbstractRenderer
 
fn() - Method in class org.dllearner.utilities.CoverageAdapter.CoverageAdapter2
 
fn() - Method in class org.dllearner.utilities.CoverageAdapter.CoverageCountAdapter2
 
followsFromKB(OWLClassExpression) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
followsFromKB() - Method in class org.dllearner.learningproblems.ClassScore
 
followsFromKB() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
 
forceSPARQL_1_0_Mode - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
FORMAL_COMMENT - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
format - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
fp() - Method in class org.dllearner.utilities.CoverageAdapter.CoverageAdapter2
 
fp() - Method in class org.dllearner.utilities.CoverageAdapter.CoverageCountAdapter2
 
FragmentExtractionStrategy - Enum in org.dllearner.algorithms.pattern
 
FragmentExtractor - Interface in org.dllearner.algorithms.pattern
 
fromManchester(String, AbstractReasonerComponent, OWLDataFactory) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
fromManchester(String, AbstractReasonerComponent, OWLDataFactory, boolean) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
fromTreeString(String) - Static method in class org.dllearner.kb.sparql.CBDStructureTree
 
Full - Static variable in class org.dllearner.algorithms.qtl.util.PrefixCCPrefixMapping
 
FULL_RULE_FILE - Static variable in class org.dllearner.reasoning.SKOSReasoner
The location of the full SKOS rule definitions on the class path
FULL_RULES - Static variable in class org.dllearner.reasoning.SKOSReasoner
Constant: used to indicate full SKOS processing level
fullDataLoaded - Variable in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
FullIRIEntityShortFromProvider - Class in org.dllearner.algorithms.pattern
 
FullIRIEntityShortFromProvider() - Constructor for class org.dllearner.algorithms.pattern.FullIRIEntityShortFromProvider
 
Function - Class in org.dllearner.prolog
 
Function(Function) - Constructor for class org.dllearner.prolog.Function
 
Function(String, ArrayList<Term>) - Constructor for class org.dllearner.prolog.Function
 
Function(String, Term) - Constructor for class org.dllearner.prolog.Function
 
Function(Term, String) - Constructor for class org.dllearner.prolog.Function
 
Function(Term, String, Term) - Constructor for class org.dllearner.prolog.Function
 
Function(FunctionDefinition, ArrayList<Term>) - Constructor for class org.dllearner.prolog.Function
 
Functional() - Method in class org.dllearner.parser.KBParser
 
FunctionalDataPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
FunctionalDataPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.FunctionalDataPropertyAxiomLearner
 
FunctionalObjectPropertyAxiomLearner - Class in org.dllearner.algorithms.properties
 
FunctionalObjectPropertyAxiomLearner(SparqlEndpointKS) - Constructor for class org.dllearner.algorithms.properties.FunctionalObjectPropertyAxiomLearner
 
FunctionDefinition - Class in org.dllearner.prolog
 
FunctionDefinition(String, int, int) - Constructor for class org.dllearner.prolog.FunctionDefinition
 
FunctionDefinition(Function) - Constructor for class org.dllearner.prolog.FunctionDefinition
 
FuzzyClassExpressionLearningAlgorithm - Interface in org.dllearner.core
Basic interface for algorithms learning fuzzy OWL/DL class expressions.
fuzzyDatatypes - Variable in class org.dllearner.utilities.FuzzyOwl2
 
fuzzyExamples - Variable in class org.dllearner.learningproblems.FuzzyPosNegLP
 
FuzzyIndividual - Class in org.dllearner.core.owl.fuzzydll
 
FuzzyIndividual(String, double) - Constructor for class org.dllearner.core.owl.fuzzydll.FuzzyIndividual
 
FuzzyIndividualReasoner - Interface in org.dllearner.core.fuzzydll
Reasoning requests/queries related to fuzzy reasoning over individuals in the knowledge base.
fuzzyModifiers - Variable in class org.dllearner.utilities.FuzzyOwl2
 
FuzzyOwl2 - Class in org.dllearner.utilities
General class translating from OWL 2 into some fuzzy OWLClassExpression Logic language.
FuzzyOwl2(String, String) - Constructor for class org.dllearner.utilities.FuzzyOwl2
Constructor.
FuzzyOwl2toFuzzyDL - Class in org.dllearner.utilities
Class translating from OWL 2 into fuzzyDL syntax.
FuzzyOwl2toFuzzyDL(String, String) - Constructor for class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
FuzzyPosNegLP - Class in org.dllearner.learningproblems
 
FuzzyPosNegLP() - Constructor for class org.dllearner.learningproblems.FuzzyPosNegLP
 
FuzzyPosNegLP(AbstractReasonerComponent) - Constructor for class org.dllearner.learningproblems.FuzzyPosNegLP
 
FuzzyPosNegLPStandard - Class in org.dllearner.learningproblems
The aim of this learning problem is to learn a concept definition such that the positive examples and the negative examples do not follow.
FuzzyPosNegLPStandard() - Constructor for class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
FuzzyPosNegLPStandard(AbstractReasonerComponent) - Constructor for class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
FuzzyPosNegLPStandard(AbstractReasonerComponent, SortedSet<OWLIndividual>, SortedSet<OWLIndividual>) - Constructor for class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
fuzzyShrink(SortedSet<T>, int) - Static method in class org.dllearner.utilities.datastructures.SetManipulation
shrinks a set to the limit fuzzy here means the elements will be randomly picked
fuzzyShrinkInd(SortedSet<OWLIndividual>, int) - Static method in class org.dllearner.utilities.datastructures.SetManipulation
shrinks a set to the limit fuzzy here means the elements will be randomly picked
FuzzyUnsupportedCodeException - Exception in org.dllearner.core.fuzzydll
Exception indicating that ...
FuzzyUnsupportedCodeException() - Constructor for exception org.dllearner.core.fuzzydll.FuzzyUnsupportedCodeException
 
FuzzyUnsupportedCodeException(String) - Constructor for exception org.dllearner.core.fuzzydll.FuzzyUnsupportedCodeException
 

G

GE() - Method in class org.dllearner.parser.KBParser
 
GE - Static variable in interface org.dllearner.parser.KBParserConstants
RegularExpression Id.
Generalisation - Class in org.dllearner.algorithms.qtl.operations
 
Generalisation() - Constructor for class org.dllearner.algorithms.qtl.operations.Generalisation
 
generalise(RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.operations.Generalisation
 
GeneralisedQueryTree<N> - Class in org.dllearner.algorithms.qtl.datastructures.impl
 
GeneralisedQueryTree(QueryTree<N>) - Constructor for class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
GeneralisedQueryTree(QueryTree<N>, List<QueryTreeChange>) - Constructor for class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
generateNewConcepts(SortedSet<OWLIndividual>, SortedSet<OWLIndividual>, boolean) - Method in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
generateParseException() - Method in class org.dllearner.parser.KBParser
Generate ParseException.
generateParseException() - Method in class org.dllearner.parser.PrologParser
Generate ParseException.
generatePowerSet() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
method for generating the powerset of a frame Of Discernment
generateSchema() - Method in class org.dllearner.algorithms.schema.RDFSSchemaGenerator
 
generateSchema() - Method in interface org.dllearner.algorithms.schema.SchemaGenerator
 
generateSchema() - Method in class org.dllearner.algorithms.schema.SimpleSchemaGenerator
 
Generator - Class in org.dllearner.algorithms.decisiontrees.utils
 
Generator() - Constructor for class org.dllearner.algorithms.decisiontrees.utils.Generator
 
generator - Static variable in class org.dllearner.algorithms.decisiontrees.utils.Generator
 
GenericTree<T,V extends GenericTree<T,V>> - Class in org.dllearner.algorithms.qtl.datastructures.impl
 
GenericTree() - Constructor for class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
GenericTree(T) - Constructor for class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
GeneticRefinementOperator - Interface in org.dllearner.algorithms.hybridgp
 
get() - Static method in class org.dllearner.algorithms.qtl.util.StopURIsDBpedia
 
get() - Static method in class org.dllearner.algorithms.qtl.util.StopURIsOWL
 
get() - Static method in class org.dllearner.algorithms.qtl.util.StopURIsRDFS
 
get() - Static method in class org.dllearner.algorithms.qtl.util.StopURIsSKOS
 
GET_SAMPLE_QUERY - Static variable in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
getAbbreviatedTreeRepresentation(QueryTree, String, Map<String, String>) - Static method in class org.dllearner.algorithms.qtl.util.TreeHelper
 
getAbbreviation() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getAboxfilter() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getAccApprox2(OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in class org.dllearner.learningproblems.AccMethodAMeasureApprox
 
getAccApprox2(OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in class org.dllearner.learningproblems.AccMethodFMeasureApprox
 
getAccApprox2(OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in class org.dllearner.learningproblems.AccMethodPredAccApprox
 
getAccApprox2(OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in interface org.dllearner.learningproblems.AccMethodTwoValuedApproximate
calculate approximate accuracy for an expression, according to method
getAccessDate() - Method in class org.dllearner.kb.repository.bioportal.Success
 
getAccessedResource() - Method in class org.dllearner.kb.repository.bioportal.Success
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodAMeasure
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodFMeasure
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodFMeasureWeighted
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodJaccard
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodPredAcc
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodPredAccOCEL
 
getAccOrTooWeak2(int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodPredAccWeighted
 
getAccOrTooWeak2(int, int, int, int, double) - Method in interface org.dllearner.learningproblems.AccMethodTwoValued
Compute accuracy according to this method
getAccOrTooWeak3(int, int, int, int, int, int, double) - Method in class org.dllearner.learningproblems.AccMethodGenFMeasure
 
getAccOrTooWeak3(int, int, int, int, int, int, double) - Method in interface org.dllearner.learningproblems.AccMethodThreeValued
Calculate generalised measures according to method in A Note on the Evaluation of Inductive Concept Classification Procedures
getAccuracy() - Method in class org.dllearner.algorithms.celoe.OENode
 
getAccuracy() - Method in class org.dllearner.algorithms.el.SearchTreeNode
 
getAccuracy() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getAccuracy(EvaluatedRDFResourceTree) - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeHeuristic
 
getAccuracy() - Method in class org.dllearner.core.EvaluatedHypothesis
 
getAccuracy() - Method in class org.dllearner.core.Score
This method returns a value, which indicates how accurate a hypothesis solves a learning problem.
getAccuracy() - Method in class org.dllearner.learningproblems.AxiomScore
 
getAccuracy() - Method in class org.dllearner.learningproblems.ClassScore
 
getAccuracy() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
 
getAccuracy(int, int, int, int, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getAccuracy() - Method in class org.dllearner.learningproblems.QueryTreeScore
 
getAccuracy() - Method in class org.dllearner.learningproblems.ScorePosOnly
 
getAccuracy() - Method in class org.dllearner.learningproblems.ScoreSimple
 
getAccuracy() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getAccuracy() - Method in class org.dllearner.learningproblems.ScoreTwoValued
 
getAccuracy() - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
 
getAccuracyMethod() - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getAccuracyMethod() - Method in class org.dllearner.learningproblems.PosNegLP
 
getAccuracyOrTooWeak(V) - Method in class org.dllearner.core.AbstractLearningProblem
This method returns a value, which indicates how accurate a hypothesis solves a learning problem.
getAccuracyOrTooWeak(V, double) - Method in class org.dllearner.core.AbstractLearningProblem
This method computes the accuracy and returns -1 instead of the accuracy if the accuracy of the hypothesis is below the given threshold and the accuracy of all more special w.r.t.
getAccuracyOrTooWeak(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getAccuracyOrTooWeak(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getAccuracyOrTooWeak(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getAccuracyOrTooWeak(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosNegLPStandard
 
getAccuracyOrTooWeak(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
getAccuracyOrTooWeak(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosOnlyLP
 
getAccuracyOrTooWeak(T, double) - Method in class org.dllearner.learningproblems.PropertyAxiomLearningProblem
 
getAccuracyOrTooWeak2(AccMethodTwoValued, OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in class org.dllearner.utilities.ReasoningUtils
calculate accuracy of a concept, using the supplied accuracy method
getAccuracyOrTooWeak3(AccMethodThreeValued, OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in class org.dllearner.utilities.ReasoningUtilsCLP
Implementations of accuracy calculation for generalised measures according to method in A Note on the Evaluation of Inductive Concept Classification Procedures
getAccuracyOrTooWeakApprox(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getAccuracyOrTooWeakApprox(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getAccuracyOrTooWeakApprox(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosOnlyLP
 
getAccuracyOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getAccuracyOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getAccuracyOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getAccuracyOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.PosOnlyLP
 
getAccuracyOrTooWeakExact2(AccMethodTwoValued, ReasoningUtils.CoverageCount[], double) - Method in class org.dllearner.utilities.ReasoningUtils
wrapper to call accuracy method with coverage count
getAccuracyOrTooWeakExact3(AccMethodThreeValued, OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>, Collection<OWLIndividual>, double) - Method in class org.dllearner.utilities.ReasoningUtilsCLP
 
getAccuracyOrTooWeakExact3(AccMethodThreeValued, OWLClassExpression, Set<OWLIndividual>, Set<OWLIndividual>, Set<OWLIndividual>, double) - Method in class org.dllearner.utilities.ReasoningUtilsCLP
 
getAccuracyPenalty() - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
getAdc() - Method in class org.dllearner.algorithms.gp.Program
 
getAddition() - Method in class org.dllearner.learningproblems.ClassScore
Let C be the considered class OWLClassExpression and A the class to learn.
getAddition() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
 
getAddition() - Method in class org.dllearner.learningproblems.ScorePosOnly
Let C be the considered class expression and A the class to learn.
getAdditionalInstances() - Method in class org.dllearner.learningproblems.ClassScore
 
getAdditionalInstances() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
 
getAdditionalInstances() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosOnly
 
getAdditionalInstances() - Method in class org.dllearner.learningproblems.ScorePosOnly
 
getAlgorithm(AxiomType<? extends OWLAxiom>) - Method in class org.dllearner.algorithms.properties.MultiPropertyAxiomLearner
 
getAlgorithmClass(AxiomType<? extends OWLAxiom>) - Static method in class org.dllearner.algorithms.properties.AxiomAlgorithms
 
getAllClasses() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getAllClasses() - Method in class org.dllearner.kb.sparql.SPARQLTasks
 
getAllConcepts() - Method in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
getAllDataProperties() - Method in class org.dllearner.kb.sparql.SPARQLTasks
 
getAllFilterProperties() - Static method in class org.dllearner.algorithms.qtl.filters.Filters
 
getAllObjectProperties() - Method in class org.dllearner.kb.sparql.SPARQLTasks
 
getAllowedConcepts() - Method in class org.dllearner.core.AbstractCELA
 
getAllowedDataProperties() - Method in class org.dllearner.core.AbstractCELA
 
getAllowedGeneralisations(GeneralisedQueryTree<N>) - Method in class org.dllearner.algorithms.qtl.operations.NBR
 
getAllowedObjectProperties() - Method in class org.dllearner.core.AbstractCELA
 
getAllowSKOSFilter() - Static method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getAllowYAGO_ONLYFilter() - Static method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getAllowYAGOandSKOSFilter() - Static method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getAllowYAGOFilter() - Static method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getAllRoles() - Method in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
getAllVsAllMode() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getAndSet(String) - Method in class org.dllearner.utilities.statistics.SimpleClock
 
getAnonymousClass(OWLAPIOntologyCollector) - Method in class org.dllearner.kb.extraction.BlankNode
 
getAnonymousNode(Object) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
 
getAnonymousNodeForExpressions(Object) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
 
getAPart() - Method in class org.dllearner.kb.extraction.PropertyNode
 
getApproxDelta() - Method in class org.dllearner.learningproblems.AccMethodAMeasureApprox
 
getApproxDelta() - Method in interface org.dllearner.learningproblems.AccMethodApproximate
 
getApproxDelta() - Method in class org.dllearner.learningproblems.AccMethodFMeasureApprox
 
getApproxDelta() - Method in class org.dllearner.learningproblems.AccMethodPredAccApprox
 
getApproxDelta() - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getArgument(int) - Method in class org.dllearner.prolog.Atom
 
getArgument(int) - Method in class org.dllearner.prolog.Function
 
getArguments() - Method in class org.dllearner.prolog.Atom
 
getArity() - Method in class org.dllearner.prolog.Atom
 
getArity() - Method in class org.dllearner.prolog.Function
 
getArity() - Method in class org.dllearner.prolog.FunctionDefinition
 
getArity() - Method in class org.dllearner.prolog.PredicateDefinition
 
getArity(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.OWLClassExpressionUtils
Returns the arity of a class expression.
getAScore(double, double) - Static method in class org.dllearner.learningproblems.Heuristics
Computes arithmetic mean of precision and recall, which is called "A-Score" here (A=arithmetic), but is not an established notion in machine learning.
getAScore(double, double, double) - Static method in class org.dllearner.learningproblems.Heuristics
Computes arithmetic mean of precision and recall, which is called "A-Score" here (A=arithmetic), but is not an established notion in machine learning.
getAScoreApproximationStep1(double, int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
In the first step of the AScore approximation, we estimate recall (taking the factor beta into account).
getAScoreApproximationStep2(int, double[], double, int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
In step 2 of the A-Score approximation, the precision and overall A-Score is estimated based on the estimated recall.
getAssertedDefinitions(OWLClass) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getAssertedDefinitions(OWLClass) - Method in interface org.dllearner.core.SchemaReasoner
Returns all asserted owl:equivalence class axioms for the given class.
getAssertedDefinitions(OWLClass) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getAssertedDefinitionsImpl(OWLClass) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getAssertedDefinitionsImpl(OWLClass) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getAssertedDefinitionsImpl(OWLClass) - Method in class org.dllearner.reasoning.OWLAPIReasoner
Returns asserted class definitions of given class
getAtom() - Method in class org.dllearner.prolog.Literal
 
getAtomicConceptName(OWLClass) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getAtomicConceptName(OWLClass) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getAtomicConceptsList() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getAtomicConceptsList(boolean) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getAtomicDataPropertyName(OWLDataProperty) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getAtomicDataPropertyName(OWLDataProperty) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getAtomicObjectPropertyName(OWLObjectProperty) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getAtomicObjectPropertyName(OWLObjectProperty) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getAtomicRolesList() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getAuthorSlot() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.AsymmetricObjectPropertyAxiomLearner
 
getAxiom(OWLDataProperty, OWLDataProperty) - Method in class org.dllearner.algorithms.properties.DataPropertyHierarchyAxiomLearner
Returns the hierarchy axiom based on the axiom type of the current learning algorithm between both properties.
getAxiom(OWLDataProperty, OWLDataProperty) - Method in class org.dllearner.algorithms.properties.DisjointDataPropertyAxiomLearner
 
getAxiom(OWLObjectProperty, OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.DisjointObjectPropertyAxiomLearner
 
getAxiom(OWLDataProperty, OWLDataProperty) - Method in class org.dllearner.algorithms.properties.EquivalentDataPropertyAxiomLearner
 
getAxiom(OWLObjectProperty, OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.EquivalentObjectPropertyAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.FunctionalObjectPropertyAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.InverseFunctionalObjectPropertyAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.IrreflexiveObjectPropertyAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
getAxiom(OWLObjectProperty, OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.ObjectPropertyHierarchyAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.ReflexiveObjectPropertyAxiomLearner
 
getAxiom(OWLDataProperty, OWLDataProperty) - Method in class org.dllearner.algorithms.properties.SubDataPropertyOfAxiomLearner
 
getAxiom(OWLObjectProperty, OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.SubObjectPropertyOfAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.SymmetricObjectPropertyAxiomLearner
 
getAxiom(OWLObjectProperty) - Method in class org.dllearner.algorithms.properties.TransitiveObjectPropertyAxiomLearner
 
getAxiom() - Method in class org.dllearner.core.EvaluatedAxiom
 
getAxiomType() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getAxiomTypes(EntityType<? extends OWLEntity>) - Static method in class org.dllearner.algorithms.properties.AxiomAlgorithms
 
getBaseDir() - Method in class org.dllearner.kb.KBFile
 
getBaseDir() - Method in class org.dllearner.kb.OWLFile
 
getBaseQueryTrees() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
getBaseQueryTrees() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
getBaseURI() - Method in class org.dllearner.algorithms.qtl.util.SPARQLEndpointEx
 
getBaseURI() - Method in interface org.dllearner.core.BaseReasoner
Returns the base URI of the knowledge base.
getBaseURI() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getBaseURI() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getBaseURI() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getBBA(int, int, int) - Static method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.DSTUtils
 
getBBA(OWLIndividual, EvidentialModel) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getBeam() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getBeam() - Method in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
getBeginColumn() - Method in class org.dllearner.parser.SimpleCharStream
Get token beginning column number.
getBeginLine() - Method in class org.dllearner.parser.SimpleCharStream
Get token beginning line number.
getBest() - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionSet
 
getBestAccuracy() - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionSet
 
getBestEvaluatedAxiom() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getBestEvaluatedAxioms(Set<EvaluatedAxiom<T>>, int) - Static method in class org.dllearner.core.EvaluatedAxiom
 
getBestEvaluatedAxioms(Set<EvaluatedAxiom<T>>, double) - Static method in class org.dllearner.core.EvaluatedAxiom
 
getBestEvaluatedAxioms(Set<EvaluatedAxiom<T>>, int, double) - Static method in class org.dllearner.core.EvaluatedAxiom
 
getBestSolution() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getBestSolution() - Method in class org.dllearner.algorithms.qtl.QTL2Disjunctive
 
getBestSolution() - Method in class org.dllearner.algorithms.qtl.QTL2DisjunctiveMultiThreaded
 
getBestSPARQLQuery() - Method in interface org.dllearner.core.SparqlQueryLearningAlgorithm
 
getBeta() - Method in class org.dllearner.algorithms.properties.ObjectPropertyHierarchyAxiomLearner
 
getBetaEq() - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getBetaSC() - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getBlankNode(int) - Static method in class org.dllearner.kb.aquisitors.BlankNodeCollector
 
getBlankNode(int) - Method in class org.dllearner.kb.aquisitors.SparqlTupleAquisitor
 
getBlankNode(int) - Method in class org.dllearner.kb.aquisitors.TupleAquisitor
 
getBlankNodeMap() - Static method in class org.dllearner.kb.aquisitors.BlankNodeCollector
 
getBNodeId() - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
 
getBody() - Method in class org.dllearner.prolog.Clause
 
getBooleanDatatypeMembers(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getBooleanDatatypeMembers(OWLDataProperty) - Method in interface org.dllearner.core.IndividualReasoner
Convenience method, which can be used if it is known that the property has values which can be parsed as boolean value.
getBooleanDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getBooleanDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getBooleanDatatypeProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getBooleanDatatypeProperties() - Method in interface org.dllearner.core.BaseReasoner
Gets all data properties with range xsd:boolean.
getBooleanDatatypePropertiesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getBooleanDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getBooleanDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getBooleanDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getBottomClassNode() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getBottomConcept() - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getBottomConcept() - Method in class org.dllearner.core.owl.ClassHierarchy
 
getBottomConcept() - Method in class org.dllearner.core.owl.DatatypePropertyHierarchy
 
getBottomConcept() - Method in class org.dllearner.core.owl.ObjectPropertyHierarchy
 
getBottomConceptName() - Method in class org.dllearner.utilities.FuzzyOwl2
 
getBottomConceptName() - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getBottomDataPropertyName() - Method in class org.dllearner.utilities.FuzzyOwl2
 
getBottomDataPropertyName() - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getBottomDataPropertyNode() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getBottomObjectPropertyName() - Method in class org.dllearner.utilities.FuzzyOwl2
 
getBottomObjectPropertyName() - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getBottomObjectPropertyNode() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getBPart() - Method in class org.dllearner.kb.extraction.DatatypePropertyNode
 
getBPart() - Method in class org.dllearner.kb.extraction.PropertyNode
 
getBreakSuperClassesAfter() - Method in class org.dllearner.kb.extraction.Configuration
 
getBreakSuperClassRetrievalAfter() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getCache() - Method in class org.dllearner.kb.SparqlEndpointKS
 
getCacheDir() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getCacheDirectory() - Method in class org.dllearner.kb.sparql.ExtractionDBCache
 
getCacheSize() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getCacheSize() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getCandidatePostReductionSize() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getCandidates() - Method in class org.dllearner.algorithms.properties.DataPropertyHierarchyAxiomLearner
Returns the candidate properties for comparison.
getCandidates() - Method in class org.dllearner.algorithms.properties.ObjectPropertyHierarchyAxiomLearner
Returns the candidate properties for comparison.
getCardinalityLimit() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getCategoryIds() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getCBD(OWLIndividual, int) - Method in class org.dllearner.utilities.owl.OWLAxiomCBDGenerator
 
getChanges() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
getChild(int) - Method in class org.dllearner.algorithms.gp.OWLClassExpressionTree
 
getChildAt(int) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
getChildConcepts() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getChildCount() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getChildCount() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getChildren() - Method in class org.dllearner.algorithms.el.SearchTreeNode
 
getChildren() - Method in class org.dllearner.algorithms.gp.OWLClassExpressionTree
 
getChildren() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
getChildren() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getChildren(Object) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getChildren() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
getChildren(Node) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
getChildren() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getChildren(Object) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getChildren() - Method in class org.dllearner.core.AbstractSearchTreeNode
 
getChildren(T) - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getChildren(T, boolean) - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getChildren(T) - Method in interface org.dllearner.core.owl.Hierarchy
 
getChildren(T, boolean) - Method in interface org.dllearner.core.owl.Hierarchy
 
getChildren() - Method in interface org.dllearner.core.ref.SearchTreeNode
 
getChildren() - Method in class org.dllearner.core.ref.SearchTreeNodeSimple
 
getChildren() - Method in interface org.dllearner.utilities.datastructures.SearchTreeNode
The children of this node.
getChildren(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.OWLClassExpressionUtils
Returns all direct child expressions of a class expression.
getChildrenClosure() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getChildrenClosure() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getClassCandidates(OWLClassExpression) - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getClassCandidates(OWLClassExpression, Set<OWLClass>) - Method in class org.dllearner.refinementoperators.Utility
 
getClasses() - Method in interface org.dllearner.core.BaseReasoner
Gets all named classes in the knowledge base, e.g.
getClasses() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getClasses() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getClasses() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getClassesForInstance(String, int) - Method in class org.dllearner.kb.sparql.SPARQLTasks
get all direct Classes of an instance.
getClassExpressionTests() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getClassExpressionTests() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getClassExpressionType() - Method in class org.dllearner.core.owl.OWLObjectIntersectionOfImplExt
 
getClassExpressionType() - Method in class org.dllearner.core.owl.OWLObjectUnionOfImplExt
 
getClassHierarchy() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getClassHierarchy() - Method in interface org.dllearner.core.SchemaReasoner
Computes and returns the class hierarchy of the knowledge base.
getClassLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getClassName(OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
Gets a String representation of an OWL 2 class.
getClassToDescribe() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getClassToDescribe() - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
getClassToDescribe() - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getClauses() - Method in class org.dllearner.prolog.Program
 
getCodingScheme() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getCoef0() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getColumn() - Method in class org.dllearner.parser.SimpleCharStream
Deprecated. 
getColumnHeaders() - Method in class org.dllearner.utilities.statistics.Table
 
getColumns() - Method in class org.dllearner.utilities.statistics.Table
 
getCombos(int) - Static method in class org.dllearner.refinementoperators.MathOperations
Given number, the functions returns all combinations of natural numbers plus the number count (which can be thought of as the number of interconnecting symbols between those numbers) adds up to number.
getCombos(int, int) - Static method in class org.dllearner.refinementoperators.MathOperations
Methods for computing combinations with the additional restriction that maxValue is the highest natural number, which can occur.
getCommission() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
getCommission() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getCommissionErrorRate() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getCompleteSet() - Method in class org.dllearner.utilities.datastructures.SortedSetTuple
 
getComplexity(RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns the complexity of the given query tree.
getComplexityMeasure() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
 
getComplexityMeasure() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractModel
 
getComplexityMeasure() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getComponentClass(String) - Method in class org.dllearner.core.AnnComponentManager
Get the corresponding component class given the long or short name.
getComponents() - Method in class org.dllearner.core.AnnComponentManager
Returns a list of all available components in this instance of ComponentManager.
getComponentsNamed() - Method in class org.dllearner.core.AnnComponentManager
Convenience method, which returns a list of components along with their name.
getComponentsNamedShort() - Method in class org.dllearner.core.AnnComponentManager
Convenience method, which returns a list of components along with their name.
getComponentsOfType(Class) - Method in class org.dllearner.core.AnnComponentManager
Get registered components which are of the specified type.
getComponentStrings() - Method in class org.dllearner.core.AnnComponentManager
Returns a list of all available components in this instance of ComponentManager.
getComponentStringsOfType(Class) - Method in class org.dllearner.core.AnnComponentManager
Get registered components which are of the specified type.
getConcept() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getConceptCacheHits() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getConciseBoundedDescription(String) - Method in class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
getConciseBoundedDescription(String, int) - Method in class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
getConciseBoundedDescription(String, int, boolean) - Method in class org.dllearner.kb.sparql.BlanknodeResolvingCBDGenerator
 
getConciseBoundedDescription(String) - Method in class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
getConciseBoundedDescription(String, int) - Method in class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
getConciseBoundedDescription(String, int, boolean) - Method in class org.dllearner.kb.sparql.CachingConciseBoundedDescriptionGenerator
 
getConciseBoundedDescription(String) - Method in interface org.dllearner.kb.sparql.ConciseBoundedDescriptionGenerator
 
getConciseBoundedDescription(String, int) - Method in interface org.dllearner.kb.sparql.ConciseBoundedDescriptionGenerator
 
getConciseBoundedDescription(String, int, boolean) - Method in interface org.dllearner.kb.sparql.ConciseBoundedDescriptionGenerator
Computes the CBD of given depth for the given resource.
getConciseBoundedDescription(String, int, boolean) - Method in class org.dllearner.kb.sparql.ConciseBoundedDescriptionGeneratorImpl
 
getConciseBoundedDescription(String, int, boolean) - Method in class org.dllearner.kb.sparql.SymmetricConciseBoundedDescriptionGeneratorImpl
 
getConciseBoundedDescription(String, CBDStructureTree) - Method in class org.dllearner.kb.sparql.TreeBasedConciseBoundedDescriptionGenerator
 
getConciseBoundedDescription(String, int, boolean) - Method in class org.dllearner.kb.sparql.TreeBasedConciseBoundedDescriptionGenerator
 
getConfidence() - Method in class org.dllearner.learningproblems.AxiomScore
 
getConfidenceInterval95Wald(int, int) - Static method in class org.dllearner.learningproblems.Heuristics
Computes the 95% confidence interval of an experiment with boolean outcomes, e.g.
getConfidenceInterval95WaldAverage(int, int) - Static method in class org.dllearner.learningproblems.Heuristics
Computes the 95% confidence interval average of an experiment with boolean outcomes, e.g.
getConfigOptions(Class<? extends Component>) - Static method in class org.dllearner.core.AnnComponentManager
Returns the config options of a DL-Learner component.
getConfiguration() - Method in class org.dllearner.kb.extraction.Manager
 
getConfirmationFunctionValue(List<T>) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
Computation of the confirmation function
getConflict(MassFunction) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
Compute the conflict between two hypotheses
getConfusionMeasure() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
The method computes a confusion measure described in Smarandache et.al as discordant measure
getContactEmail() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getContactName() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getConverter() - Method in class org.dllearner.kb.OWLAPIOntology
Get the OntologyToByteConverter associated with this object.
getConverter() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
Get the OntologyToByteConverter associated with this object.
getCoreComponentTypes(Class<? extends Component>) - Static method in class org.dllearner.core.AnnComponentManager
Convenience method to retrieve core types of a component.
getCost() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getCost() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getCount() - Method in class org.dllearner.utilities.statistics.Stat
Gets the number of numbers.
getCountValue(String) - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
getCountValue(String, Model) - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
Return the integer value of a SPARQL query that just returns a single COUNT value.
getCoverage() - Method in class org.dllearner.learningproblems.ClassScore
 
getCoverage() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
 
getCoverage() - Method in class org.dllearner.learningproblems.ScorePosOnly
 
getCoverage(OWLClassExpression, Collection<OWLIndividual>...) - Method in class org.dllearner.utilities.ReasoningUtils
binary partition a list of sets into true and false, depending on whether they satisfy concept.
getCoverage(OWLClassExpression, Set<OWLIndividual>...) - Method in class org.dllearner.utilities.ReasoningUtils
binary partition a list of sets into true and false, depending on whether they satisfy concept
getCoverage3(OWLClassExpression, OWLClassExpression, Set<OWLIndividual>...) - Method in class org.dllearner.utilities.ReasoningUtils
partition an array of sets into true, false and unknown, depending on whether they satisfy concept A or B
getCoverageCLP(OWLClassExpression, Collection<OWLIndividual>, Collection<OWLIndividual>) - Method in class org.dllearner.utilities.ReasoningUtilsCLP
get coverage result for class learning problem.
getCoverageCount(OWLClassExpression, Collection<OWLIndividual>...) - Method in class org.dllearner.utilities.ReasoningUtils
count the numbers of individuals satisfying a concept.
getCoverageCount(OWLClassExpression, Set<OWLIndividual>...) - Method in class org.dllearner.utilities.ReasoningUtils
count the numbers of individuals satisfying a concept
getCoveredInstances() - Method in class org.dllearner.learningproblems.ClassScore
 
getCoveredInstances() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
 
getCoveredInstances() - Method in class org.dllearner.learningproblems.ScorePosOnly
 
getCoveredNegativeExample() - Method in exception org.dllearner.algorithms.qtl.exception.NegativeTreeCoverageExecption
 
getCoveredNegatives() - Method in class org.dllearner.algorithms.el.SearchTreeNode
 
getCoveredNegatives() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getCoveredNegatives() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
 
getCoveredNegatives() - Method in class org.dllearner.learningproblems.QueryTreeScore
 
getCoveredNegatives() - Method in class org.dllearner.learningproblems.ScorePosNeg
 
getCoveredNegatives() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getCoveredNegatives() - Method in class org.dllearner.learningproblems.ScoreTwoValued
 
getCoveredPositives() - Method in class org.dllearner.algorithms.el.SearchTreeNode
 
getCoveredPositives() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getCoveredPositives() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
 
getCoveredPositives() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosOnly
 
getCoveredPositives() - Method in class org.dllearner.learningproblems.QueryTreeScore
 
getCoveredPositives() - Method in class org.dllearner.learningproblems.ScorePosNeg
 
getCoveredPositives() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getCoveredPositives() - Method in class org.dllearner.learningproblems.ScoreTwoValued
 
getCovPosMinusCovNeg() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
Used to detect whether one node is more accurate than another one with calculating accuracy itself.
getCrossValidationFolds() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getCrossValidationFolds() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getCurrentlyBestAccuracy() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getCurrentlyBestAccuracy() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getCurrentlyBestAxioms(int) - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getCurrentlyBestAxioms() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestAxioms(int) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestAxioms(int, double) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestAxioms(double) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestAxioms() - Method in interface org.dllearner.core.AxiomLearningAlgorithm
 
getCurrentlyBestAxioms(int) - Method in interface org.dllearner.core.AxiomLearningAlgorithm
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.decisiontrees.tdt.TDTClassifier
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.NaiveALLearner
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.qtl.QTL2Disjunctive
 
getCurrentlyBestDescription() - Method in class org.dllearner.algorithms.qtl.QTL2DisjunctiveMultiThreaded
 
getCurrentlyBestDescription() - Method in class org.dllearner.core.AbstractCELA
 
getCurrentlyBestDescriptions() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getCurrentlyBestDescriptions() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getCurrentlyBestDescriptions(int) - Method in class org.dllearner.algorithms.DisjointClassesLearner
 
getCurrentlyBestDescriptions() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getCurrentlyBestDescriptions(int) - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getCurrentlyBestDescriptions() - Method in class org.dllearner.core.AbstractCELA
 
getCurrentlyBestDescriptions(int) - Method in class org.dllearner.core.AbstractCELA
 
getCurrentlyBestDescriptions(int, boolean) - Method in class org.dllearner.core.AbstractCELA
 
getCurrentlyBestDescriptions(int) - Method in interface org.dllearner.core.ClassExpressionLearningAlgorithm
 
getCurrentlyBestDescriptions(int) - Method in interface org.dllearner.core.FuzzyClassExpressionLearningAlgorithm
 
getCurrentlyBestEvaluatedAxiom() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms() - Method in class org.dllearner.algorithms.properties.MultiPropertyAxiomLearner
 
getCurrentlyBestEvaluatedAxioms(AxiomType<? extends OWLAxiom>) - Method in class org.dllearner.algorithms.properties.MultiPropertyAxiomLearner
 
getCurrentlyBestEvaluatedAxioms(AxiomType<? extends OWLAxiom>, double) - Method in class org.dllearner.algorithms.properties.MultiPropertyAxiomLearner
 
getCurrentlyBestEvaluatedAxioms() - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getCurrentlyBestEvaluatedAxioms(int) - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getCurrentlyBestEvaluatedAxioms() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms(int) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms(double) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms(int, double) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms() - Method in interface org.dllearner.core.AxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms(int) - Method in interface org.dllearner.core.AxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedAxioms(int, double) - Method in interface org.dllearner.core.AxiomLearningAlgorithm
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.decisiontrees.tdt.TDTClassifier
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.NaiveALLearner
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.qtl.QTL2Disjunctive
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.algorithms.qtl.QTL2DisjunctiveMultiThreaded
 
getCurrentlyBestEvaluatedDescription() - Method in class org.dllearner.core.AbstractCELA
Returns the best descriptions obtained so far.
getCurrentlyBestEvaluatedDescriptions() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getCurrentlyBestEvaluatedDescriptions() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getCurrentlyBestEvaluatedDescriptions(int) - Method in class org.dllearner.algorithms.DisjointClassesLearner
 
getCurrentlyBestEvaluatedDescriptions() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getCurrentlyBestEvaluatedDescriptions(int) - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getCurrentlyBestEvaluatedDescriptions() - Method in class org.dllearner.core.AbstractCELA
Returns a sorted set of the best descriptions found so far.
getCurrentlyBestEvaluatedDescriptions(int, double, boolean) - Method in class org.dllearner.core.AbstractCELA
Returns a filtered list of currently best class descriptions.
getCurrentlyBestEvaluatedDescriptions(int) - Method in class org.dllearner.core.AbstractCELA
Return the best currently found concepts up to some maximum count (no minimality filter used).
getCurrentlyBestEvaluatedDescriptions(double) - Method in class org.dllearner.core.AbstractCELA
Returns a fraction of class descriptions with sufficiently high accuracy.
getCurrentlyBestEvaluatedDescriptions(int) - Method in interface org.dllearner.core.ClassExpressionLearningAlgorithm
Return the best currently found concepts up to some maximum count (no minimality filter used).
getCurrentlyBestEvaluatedDescriptions(int) - Method in interface org.dllearner.core.FuzzyClassExpressionLearningAlgorithm
Return the best currently found concepts up to some maximum count (no minimality filter used).
getCurrentlyBestMostGeneralEvaluatedDescriptions() - Method in class org.dllearner.core.AbstractCELA
 
getCurrentlyBestSPARQLQueries(int) - Method in interface org.dllearner.core.SparqlQueryLearningAlgorithm
 
getCurrentmodel() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getCurrentmodel() - Method in class org.dllearner.algorithms.decisiontrees.tdt.TDTClassifier
 
getCurrentOntology() - Method in class org.dllearner.kb.extraction.OWLAPIOntologyCollector
 
getCurrentPosition() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
Gets a list describing the position of this node within the tree.
getCurrentRuntimeInMilliSeconds() - Method in class org.dllearner.core.AbstractCELA
 
getData() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
getData() - Method in interface org.dllearner.core.ref.SearchTreeNode
 
getData() - Method in class org.dllearner.core.ref.SearchTreeNodeSimple
 
getData() - Method in class org.dllearner.kb.repository.bioportal.Success
 
getDataAllValuesFromName(OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataAllValuesFromName(OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataAllValuesLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataCardinalityLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataComplementLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataExactCardinalityRestrictionName(int, OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataExactCardinalityRestrictionName(int, OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataExactCardinalityRestrictionName(int, OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataExactCardinalityRestrictionName(int, OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataFactory() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDataHasValueLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataHasValueName(OWLDataPropertyExpression, OWLLiteral) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataHasValueName(OWLDataPropertyExpression, OWLLiteral) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataIntersectionLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataMaxCardinalityRestrictionName(int, OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataMaxCardinalityRestrictionName(int, OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataMaxCardinalityRestrictionName(int, OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataMaxCardinalityRestrictionName(int, OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataMinCardinalityRestrictionName(int, OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataMinCardinalityRestrictionName(int, OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataMinCardinalityRestrictionName(int, OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataMinCardinalityRestrictionName(int, OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataOneOfLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataProperties() - Method in class org.dllearner.utilities.split.AbstractDateTimeValuesSplitter
 
getDataProperties() - Method in class org.dllearner.utilities.split.AbstractNumericValuesSplitter
 
getDataProperties() - Method in class org.dllearner.utilities.split.AbstractValuesSplitter
 
getDataPropertiesByRange(XSDVocabulary) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDataPropertiesByRange(Set<OWLDatatype>) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDataPropertiesByRange(IRI) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDataPropertyDomains() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDataPropertyDomains() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDataPropertyDomains(OWLDataProperty, boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDataPropertyHierarchy() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getDataPropertyName(OWLDataPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
Gets a String representation of an OWL 2 data property.
getDataPropertyRelationships(OWLIndividual) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDataPropertyRelationships(OWLIndividual) - Method in interface org.dllearner.core.IndividualReasoner
A map of data properties related to values, e.g.
getDataPropertyRelationshipsImpl(OWLIndividual) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDataPropertyValues(OWLNamedIndividual, OWLDataProperty) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDataProperyLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDataRange() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getDataSomeValuesFromName(OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getDataSomeValuesFromName(OWLDataPropertyExpression, OWLDataRange) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getDataSomeValuesLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDatatype() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getDatatype() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
getDatatype() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getDatatype(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
Returns the datatype of the data property, i.e.
getDatatype(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDatatype(OWLDataProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDatatype(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDatatypeLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDatatypeMembers(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDatatypeMembers(OWLDataProperty) - Method in interface org.dllearner.core.IndividualReasoner
Computes and returns all connections between individuals and values through the specified property, e.g.
getDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDatatypeProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDatatypeProperties() - Method in interface org.dllearner.core.BaseReasoner
Gets all data properties in the knowledge base, e.g.
getDatatypePropertiesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDatatypePropertyHierarchy() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDatatypePropertyHierarchy() - Method in interface org.dllearner.core.SchemaReasoner
Computes and returns the data property hierarchy of the knowledge base.
getDatatypePropertyNode() - Method in class org.dllearner.kb.extraction.InstanceNode
 
getDatatypes() - Method in class org.dllearner.utilities.split.AbstractDateTimeValuesSplitter
 
getDatatypes() - Method in class org.dllearner.utilities.split.AbstractNumericValuesSplitter
 
getDatatypes() - Method in interface org.dllearner.utilities.split.ValuesSplitter
 
getDataUnionLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDateCreated() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDateReleased() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDBpediaBaseURI() - Static method in class org.dllearner.algorithms.qtl.util.Prefixes
 
getDBPediaFilterProperties() - Static method in class org.dllearner.algorithms.qtl.filters.Filters
 
getDBpediaNavigatorFilter() - Static method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getDBpediaNavigatorManipulator() - Static method in class org.dllearner.kb.manipulator.Manipulator
 
getDefaultAuthorSlot() - Static method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDefaultCache() - Static method in class org.dllearner.kb.sparql.Cache
 
getDefaultCacheDir() - Static method in class org.dllearner.kb.sparql.Cache
the default cachedir normally is "cache".
getDefaultDefinitionSlot() - Static method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDefaultGraphURI() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getDefaultGraphURIs() - Method in class org.dllearner.kb.OWLFile
 
getDefaultGraphURIs() - Method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getDefaultGraphURIs() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getDefaultGraphURIs() - Method in class org.dllearner.kb.SparqlEndpointKS
 
getDefaultManipulator() - Static method in class org.dllearner.kb.manipulator.Manipulator
 
getDefaultMetric() - Static method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getDefaultPreferredNameSlot() - Static method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDegree() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getDegree(OWLAxiom) - Method in class org.dllearner.utilities.FuzzyOwl2
Returns the degree in the annotation of an axiom.
getDelegate() - Method in class org.dllearner.refinementoperators.SynchronizedRefinementOperator
 
getDependency(OWLEntity, OWLEntity) - Method in class org.dllearner.algorithms.schema.EntityDependencyMatrix
Returns the degree by which entity1 depends on entity2.
getDepth() - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
getDepth(GenericTree<T, V>) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns the depth of the query tree
getDepth(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.OWLClassExpressionUtils
Returns the depth of a class expression.
getDepth2Root(OWLClassExpression) - Method in class org.dllearner.core.owl.ClassHierarchy
 
getDesc() - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
 
getDescription() - Method in class org.dllearner.algorithms.celoe.OENode
 
getDescription(Class<? extends Component>) - Static method in class org.dllearner.core.AnnComponentManager
Returns the name of a DL-Learner component.
getDescription(Component) - Static method in class org.dllearner.core.AnnComponentManager
Returns the description of a DL-Learner component.
getDescription() - Method in class org.dllearner.core.EvaluatedHypothesis
Gets the description, which was evaluated.
getDescription() - Method in class org.dllearner.core.owl.ContextDescription
 
getDescription() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDescriptionDepth() - Method in class org.dllearner.core.EvaluatedDescription
 
getDescriptionLength() - Method in class org.dllearner.core.EvaluatedDescription
 
getDescriptionTree() - Method in class org.dllearner.algorithms.el.SearchTreeNode
 
getDifferentIndividuals(OWLNamedIndividual) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDisjointClasses(OWLClassExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDisjointDataProperties(OWLDataPropertyExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDisjointObjectProperties(OWLObjectPropertyExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getDisjointProperties(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDisjointProperties(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDisplayLabel() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDistance(RDFResourceTree, RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeEditDistance
 
getDistanceApprox(RDFResourceTree, RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeEditDistance
Returns a distance between tree1 and tree2 based on the LGG of both.
getDistancePenalty() - Method in class org.dllearner.learningproblems.QueryTreeScore
 
getDistinctObjectsFrequency() - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
getDistinctSubjectsFrequency() - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
getDocumentation() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDocumentationSlot() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDomain(OWLObjectProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDomain(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDomain(T) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDomain(OWLObjectProperty) - Method in interface org.dllearner.core.SchemaReasoner
Returns the domain of this object property.
getDomain(OWLDataProperty) - Method in interface org.dllearner.core.SchemaReasoner
Returns the domain of this data property.
getDomainImpl(OWLObjectProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDomainImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDomainImpl(T) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDomainImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDomainImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDomainImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDomainImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDomainImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDomainImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDomainInstances(String, int) - Method in class org.dllearner.kb.sparql.SPARQLTasks
Returns all instances that are in the prefield (subject) of the property/role.
getDomains(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDoubleDatatypeMembers(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDoubleDatatypeMembers(OWLDataProperty) - Method in interface org.dllearner.core.IndividualReasoner
Convenience method, which can be used if it is known that the property has values which can be parsed as double.
getDoubleDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDoubleDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDoubleDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDoubleDatatypeProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDoubleDatatypeProperties() - Method in interface org.dllearner.core.BaseReasoner
Gets all data properties with a range that describes floating point values, i.e.
getDoubleDatatypePropertiesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getDoubleDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getDoubleDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDoubleDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getDoubleValue() - Method in class org.dllearner.prolog.Number
 
getDoubleValues(OWLDataProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getDownloadLocation() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getDurationAsString(long) - Method in class org.dllearner.core.AbstractCELA
 
getEdge() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeChange
 
getEdge(QueryTree<N>) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getEdge(QueryTree<N>) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getEdges() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
Gets the edges of this node.
getEdges() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getEdges() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
getEdges(QueryTreeImpl.NodeType) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
getEdges() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getEdges(RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns the set of edges that occur in the given query tree, i.e.
getEdgeToChild(RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
Returns the edge from the current node to the given child node.
getEdgeToParent() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
Returns the edge from the parent node to the current node.
getElementGroup(Triple) - Method in class org.dllearner.utilities.QueryUtils
Returns the ElementGroup object containing the triple pattern.
getEndColumn() - Method in class org.dllearner.parser.SimpleCharStream
Get token end column number.
getEndLine() - Method in class org.dllearner.parser.SimpleCharStream
Get token end line number.
getEndpoint() - Method in class org.dllearner.kb.SparqlEndpointKS
 
getEndpointByName(String) - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointDBpedia() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointDBpediaHanne() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointDBpediaLiveAKSW() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointDBpediaLiveOpenLink() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointDBpediaLOD2Cloud() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointDOAPspace() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointGovTrack() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointLinkedGeoData() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointLinkedMDB() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointLOD2Cloud() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointMusicbrainz() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointMyOpenlink() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointRevyu() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointSparqlette() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointSWConference() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEndpointURL() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getEndpointUSCensus() - Static method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getEntities() - Method in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
Return the entities contained in the current knowledge base.
getEntities(EntityType<T>) - Method in class org.dllearner.algorithms.schema.AbstractSchemaGenerator
Return the entities contained in the current knowledge base for the given entity type.
getEntities() - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getEntityDependencyMatrix(OWLOntology) - Static method in class org.dllearner.algorithms.schema.EntityDependencyMatrix
 
getentityToDescribe() - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getEntityToDescribe() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getEntries() - Method in class org.dllearner.kb.repository.bioportal.BioPortalRepository
 
getEntries() - Method in class org.dllearner.kb.repository.LocalDirectoryOntologyRepository
 
getEntries() - Method in class org.dllearner.kb.repository.lov.LOVRepository
 
getEntries() - Method in interface org.dllearner.kb.repository.OntologyRepository
 
getEntries() - Method in class org.dllearner.kb.repository.oxford.OxfordRepository
 
getEntries() - Method in class org.dllearner.kb.repository.tones.TONESRepository
 
getEntry(int) - Method in class org.dllearner.utilities.statistics.TableColumn
 
getEpsilon() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getEquivalentClasses(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getEquivalentClasses(OWLClassExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getEquivalentClassesImpl(OWLClassExpression) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getEquivalentDataProperties(OWLDataProperty) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getEquivalentObjectProperties(OWLObjectPropertyExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getEquivalentProperties(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getEquivalentProperties(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getErrorPenalty() - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
getEvalDesc() - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
 
getEvaluatedDescription() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
getEvaluatedDescription() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
getEvaluatedFramentSize() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getExampleLoaderHelper() - Method in class org.dllearner.core.AbstractClassExpressionLearningProblem
 
getExistingAxioms() - Method in class org.dllearner.algorithms.CELOEWrapper
 
getExistingAxioms() - Method in class org.dllearner.algorithms.DisjointClassesLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.pattern.PatternBasedAxiomLearningAlgorithm
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.DataPropertyDomainAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.DataPropertyRangeAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.DisjointDataPropertyAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.DisjointObjectPropertyAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.EquivalentDataPropertyAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.EquivalentObjectPropertyAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.FunctionalDataPropertyAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.InverseObjectPropertyAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.ObjectPropertyDomainAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.ObjectPropertyRangeAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.SubDataPropertyOfAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.properties.SubObjectPropertyOfAxiomLearner
 
getExistingAxioms() - Method in class org.dllearner.algorithms.SimpleSubclassLearner
 
getExistingAxioms() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
Compute the defined axioms in the knowledge base.
getExpansionPenaltyFactor() - Method in class org.dllearner.algorithms.celoe.OEHeuristicRuntime
 
getExpansionPenaltyFactor() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getExpansionPenaltyFactor() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getExpression() - Method in class org.dllearner.algorithms.celoe.OENode
 
getExpression() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getExpression() - Method in class org.dllearner.core.AbstractSearchTreeNode
 
getExpression() - Method in interface org.dllearner.utilities.datastructures.SearchTreeNode
Gets the OWL 2 class expression at this search tree node.
getFactory() - Method in class org.dllearner.kb.extraction.OWLAPIOntologyCollector
 
getFalseDatatypeMembers(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getFalseDatatypeMembers(OWLDataProperty) - Method in interface org.dllearner.core.IndividualReasoner
Convenience method, which can be used to get all individuals, which have value "false" for the given property.
getFalseDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getFalseDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getFalseDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getFalseNegatives() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
getFalseNegatives() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
getFalsePositives() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
getFalsePositives() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
getFifth() - Method in class org.dllearner.algorithms.decisiontrees.utils.Npla
 
getFileName() - Method in class org.dllearner.kb.KBFile
 
getFileName() - Method in class org.dllearner.kb.OWLFile
 
getFilenames() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getFilePath() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getFilterCount() - Method in class org.dllearner.utilities.QueryUtils
 
getFilteredQueryTree(QueryTree<String>) - Method in class org.dllearner.algorithms.qtl.filters.KeywordBasedQueryTreeFilter
 
getFilteredQueryTree(QueryTree<String>) - Method in interface org.dllearner.algorithms.qtl.filters.QueryTreeFilter
 
getFilteredQueryTree(QueryTree<String>) - Method in class org.dllearner.algorithms.qtl.filters.QuestionBasedQueryTreeFilterAggressive
 
getFirst() - Method in class org.dllearner.algorithms.decisiontrees.utils.Npla
 
getFirstElem() - Method in class org.dllearner.algorithms.decisiontrees.utils.Triple
 
getFirstElement() - Method in class org.dllearner.algorithms.decisiontrees.utils.Couple
 
getFitness() - Method in class org.dllearner.algorithms.gp.Program
Returns the previously calculated fitness of the program.
getFMeasureOrTooWeakApprox(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
Deprecated.
getFMeasureOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getFMeasureOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getFOAFFilterProperties() - Static method in class org.dllearner.algorithms.qtl.filters.Filters
 
getForallContexts(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.ConceptTransformation
Gets the "contexts" of all \forall occurrences in a description.
getForallOccurences(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.ConceptTransformation
Counts occurrences of \forall in description.
getForAllSemantics() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getFormat() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getFourth() - Method in class org.dllearner.algorithms.decisiontrees.utils.Npla
 
getFrame() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
getFrequencyThreshold() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getFreshEntityPolicy() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getFScore(double, double) - Static method in class org.dllearner.learningproblems.Heuristics
Computes F1-Score.
getFScore(double, double, double) - Static method in class org.dllearner.learningproblems.Heuristics
Computes F-beta-Score.
getFScoreApproximation(int, double, double, int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
This method can be used to approximate F-Measure and thereby saving a lot of instance checks.
getFScoreBalanced(double, double, double) - Static method in class org.dllearner.learningproblems.Heuristics
 
getFuzzyExamples() - Method in class org.dllearner.learningproblems.FuzzyPosNegLP
 
getFuzzyIndividuals(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getFuzzyIndividuals(OWLClassExpression) - Method in interface org.dllearner.core.fuzzydll.FuzzyIndividualReasoner
 
getFuzzyIndividualsImpl(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getGainBonusFactor() - Method in class org.dllearner.algorithms.celoe.OEHeuristicRuntime
 
getGainBonusFactor() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getGamma() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getGlobalUncertaintyMeasure() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
getGoKBFilePath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getGroupIds() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getGuaranteeXgoodDescriptions() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getHasViews() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getHead() - Method in class org.dllearner.prolog.Clause
 
getHeader() - Method in class org.dllearner.utilities.statistics.TableColumn
 
getHeuristic() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getHeuristic() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getHeuristic() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getHeuristic() - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
getHeuristic() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getHeuristic() - Method in class org.dllearner.algorithms.qtl.QTL2Disjunctive
 
getHeuristic() - Method in class org.dllearner.algorithms.qtl.QTL2DisjunctiveMultiThreaded
 
getHeuristic() - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getHeuristicType() - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeHeuristic
 
getHierarchyDown() - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getHierarchyForClassURI(String) - Method in class org.dllearner.kb.sparql.simple.ClassIndexer
 
getHierarchyForURI(String) - Method in class org.dllearner.kb.sparql.simple.SchemaIndexer
 
getHierarchyUp() - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getHomepage() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getHorizontalExpansion() - Method in class org.dllearner.algorithms.celoe.OENode
 
getHorizontalExpansion() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getHTTPRequest() - Method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getId() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
getId() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getID() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.RDFResourceTree
 
getId() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getId() - Method in class org.dllearner.algorithms.qtl.datastructures.rendering.Edge
 
getId() - Method in class org.dllearner.algorithms.qtl.datastructures.rendering.Vertex
 
getId() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
getId() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getIgnoredConcepts() - Method in class org.dllearner.algorithms.el.ELLearningAlgorithm
 
getIgnoredConcepts() - Method in class org.dllearner.core.AbstractCELA
 
getIgnoredDataProperties() - Method in class org.dllearner.core.AbstractCELA
 
getIgnoredObjectProperties() - Method in class org.dllearner.core.AbstractCELA
 
GetImage() - Method in class org.dllearner.parser.SimpleCharStream
Get token literal value.
getIn() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getInBoundEdge() - Method in class org.dllearner.kb.extraction.BlankNode
 
getInconsistentClasses() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getInconsistentClasses() - Method in interface org.dllearner.core.SchemaReasoner
Returns all named classes, which are not satisfiable, i.e.
getInconsistentClassesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getInconsistentClassesImpl() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getInconsistentClassesImpl() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getInconsistentClassesImpl() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getInconsistentOWLClasses() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getIndent() - Method in class org.dllearner.algorithms.pattern.AbstractRenderer
 
getIndividualName(OWLIndividual) - Method in class org.dllearner.utilities.FuzzyOwl2
Gets a String representation of an OWL 2 individual.
getIndividualName(OWLIndividual) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getIndividualNodeSetPolicy() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getIndividuals(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getIndividuals() - Method in interface org.dllearner.core.BaseReasoner
Gets all individuals in the knowledge base, e.g.
getIndividuals(OWLClassExpression) - Method in interface org.dllearner.core.IndividualReasoner
Gets all instances of a given class expression in the knowledge base.
getIndividuals() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getIndividuals() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getIndividuals() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividuals(OWLClassExpression, int, Set<OWLIndividual>) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividuals(OWLClassExpression, int) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividuals(OWLClassExpression, Set<OWLIndividual>) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualsCount(OWLClassExpression, int, Set<OWLIndividual>) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualsCount(OWLClassExpression, int) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualsCount(OWLClassExpression, Set<OWLIndividual>) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualsCount(OWLClass) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualSet(Collection<String>) - Static method in class org.dllearner.utilities.Helper
 
getIndividualsExcluding(OWLClassExpression, OWLClassExpression, int) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualsImpl(OWLClassExpression) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getIndividualsImpl(OWLClassExpression) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getIndividualsImpl(OWLClassExpression) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getIndividualsImpl(OWLClassExpression) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIndividualsImplFast(OWLClassExpression) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getIndividualsImplStandard(OWLClassExpression) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getIndividualTuple(SortedSetTuple<String>) - Static method in class org.dllearner.utilities.Helper
 
getInduction() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
getInduction() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getInductionRate() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getInSC1() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getInSC2() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getInstance() - Static method in class org.dllearner.core.AnnComponentManager
Gets the singleton instance of ComponentManager.
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Atom
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Body
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Clause
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Function
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.List
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Literal
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Number
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.PrologConstant
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.StringConstant
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Term
 
getInstance(Variable, Term) - Method in class org.dllearner.prolog.Variable
 
getInstance() - Static method in class org.dllearner.utilities.PrefixCCMap
 
getInstanceCheckReasoningTimeNs() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getInstances() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getInstances() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getInstances(OWLClassExpression, boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getIntDatatypeMembers(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getIntDatatypeMembers(OWLDataProperty) - Method in interface org.dllearner.core.IndividualReasoner
Convenience method, which can be used if it is known that the property has values which can be parsed as integer.
getIntDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getIntDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getIntDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getIntDatatypeProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getIntDatatypeProperties() - Method in interface org.dllearner.core.BaseReasoner
Gets all integer type data properties, i.e.
getIntDatatypePropertiesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getIntDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getIntDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getIntDatatypePropertiesImpl() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getInternalURI(String) - Static method in class org.dllearner.parser.KBParser
 
getInternalVersionNumber() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getInterpretation(float) - Static method in class org.dllearner.utilities.statistics.FleissKappa
Landis and Koch (1977) gave the following table for interpreting κ values.
getIntValue() - Method in class org.dllearner.prolog.Number
 
getInverseObjectProperties(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getInverseObjectProperties(OWLObjectPropertyExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getInverseTripleFrequency(String) - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeInformativeness
 
getInverseTripleFrequency(OWLProperty) - Method in class org.dllearner.algorithms.qtl.util.InformativenessMeasures
The inverse triple frequency ITF(p), considers how many times a predicate is used in some RDF triple w.r.t.
getIRI() - Method in class org.dllearner.kb.extraction.BlankNode
 
getIRI() - Method in class org.dllearner.kb.extraction.Node
 
getIsFlat() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getIsFoundry() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getIsManual() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getIsMetadataOnly() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getIsOwner() - Method in class org.dllearner.kb.repository.bioportal.OntologyAclEntry
 
getIsOwner() - Method in class org.dllearner.kb.repository.bioportal.UserEntry
 
getIsRemote() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getIsReviewed() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getJaccardCoefficient(int, int) - Static method in class org.dllearner.learningproblems.Heuristics
Computes the Jaccard coefficient of two sets.
getJson() - Method in class org.dllearner.kb.sparql.SparqlQuery
Return the result in JSON format.
getJSONArray(Set<OWLIndividual>) - Static method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
 
getKeys() - Method in class org.dllearner.utilities.learn.UsedEntitiesDetection
 
getLabel() - Method in class org.dllearner.algorithms.el.ELDescriptionEdge
 
getLabel() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
Gets the label of this node.
getLabel() - Method in class org.dllearner.algorithms.qtl.datastructures.rendering.Edge
 
getLabel() - Method in class org.dllearner.algorithms.qtl.datastructures.rendering.Vertex
 
getLabel() - Method in class org.dllearner.algorithms.qtl.util.SPARQLEndpointEx
 
getLabel(OWLEntity) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getLabel(OWLEntity) - Method in interface org.dllearner.core.BaseReasoner
Returns the RDFS labels of an entity.
getLabelImpl(OWLEntity) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getLabelImpl(OWLEntity) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getLabelImpl(OWLEntity) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getLanguage() - Method in class org.dllearner.kb.sparql.simple.ClassIndexer
 
getLastChange() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
getLatexString() - Method in class org.dllearner.utilities.statistics.Table
 
getLeafs() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
getLeafs() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getLeafs() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getLeafs(RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns all nodes in the given query tree.
getLearningProblem() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getLearningProblem() - Method in class org.dllearner.core.AbstractCELA
The learning problem variable, which must be used by all learning algorithm implementations.
getLearningProblem() - Method in interface org.dllearner.core.LearningAlgorithm
Get underlying learning problem.
getLearningProblem() - Method in class org.dllearner.core.ref.ALCLearningAlgorithm
 
getLeastCommonSubsumer(AbstractReasonerComponent, Node, Node, EntityType<E>) - Static method in class org.dllearner.utilities.NonStandardReasoningServices
Computes the least common subsumer (LCS) of the given entities e1 and e2 if exists, otherwise null
getLeastCommonSubsumer(AbstractReasonerComponent, E, E) - Static method in class org.dllearner.utilities.NonStandardReasoningServices
Computes the least common subsumer (LCS) of the given entities e1 and e2 if exists, otherwise null
getLeaves() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getLength(OWLClassExpression) - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthCalculator
Computes the length of a class expression.
getLength(OWLClassExpression) - Static method in class org.dllearner.utilities.owl.OWLClassExpressionUtils
Returns the length of a given class expression.
getLength(OWLClassExpression, OWLClassExpressionLengthMetric) - Static method in class org.dllearner.utilities.owl.OWLClassExpressionUtils
 
getLengthMetric() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getLengthMetric() - Method in interface org.dllearner.refinementoperators.LengthLimitedRefinementOperator
 
getLengthMetric() - Method in class org.dllearner.refinementoperators.OperatorInverter
 
getLengthMetric() - Method in class org.dllearner.refinementoperators.RefinementOperatorAdapter
 
getLengthMetric() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getLengthMetric() - Method in class org.dllearner.refinementoperators.SynchronizedRefinementOperator
 
getLevel() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
Gets the level (distance from root) of this node.
getLGG(RDFResourceTree, RDFResourceTree, boolean) - Method in class org.dllearner.algorithms.qtl.operations.lgg.AbstractLGGGenerator
 
getLGG(RDFResourceTree, RDFResourceTree) - Method in interface org.dllearner.algorithms.qtl.operations.lgg.LGGGenerator
Returns the Least General Generalization of two RDF resource trees.
getLGG(RDFResourceTree, RDFResourceTree, boolean) - Method in interface org.dllearner.algorithms.qtl.operations.lgg.LGGGenerator
Returns the Least General Generalization of two RDF resource trees.
getLGG(List<RDFResourceTree>) - Method in interface org.dllearner.algorithms.qtl.operations.lgg.LGGGenerator
Returns the Least General Generalization of a list of RDF resource trees.
getLGG(List<RDFResourceTree>, boolean) - Method in interface org.dllearner.algorithms.qtl.operations.lgg.LGGGenerator
Returns the Least General Generalization of a list of RDF resource trees.
getLicenseInformation() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getLine() - Method in class org.dllearner.parser.SimpleCharStream
Deprecated. 
getLiteral() - Method in class org.dllearner.kb.extraction.LiteralNode
 
getLiteral(OWLLiteral) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Converts an OWL API literal into a JENA API literal.
getLiteralNode(OWLLiteral) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
 
getLiterals() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getLiterals() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getLiterals() - Method in class org.dllearner.prolog.Body
 
getLocation() - Method in class org.dllearner.kb.repository.bioportal.BioPortalRepository
 
getLocation() - Method in class org.dllearner.kb.repository.LocalDirectoryOntologyRepository
 
getLocation() - Method in class org.dllearner.kb.repository.lov.LOVRepository
 
getLocation() - Method in interface org.dllearner.kb.repository.OntologyRepository
Gets a OWLClassExpression of the location of the repository
getLocation() - Method in class org.dllearner.kb.repository.oxford.OxfordRepository
 
getLocation() - Method in class org.dllearner.kb.repository.tones.TONESRepository
 
getLp() - Method in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
 
getManager() - Static method in class org.dllearner.kb.repository.OntologyRepositoryManager
 
getManager() - Method in class org.dllearner.reasoning.OWLAPIReasoner
Gets the OWL API ontology manager.
getManipulator() - Method in class org.dllearner.kb.extraction.Configuration
 
getManipulator() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getManipulatorByName(String) - Static method in class org.dllearner.kb.manipulator.Manipulator
 
getMapping(OWLIndividual) - Method in class org.dllearner.utilities.IndividualMapping
 
getMatch() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
getMatch() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getMatchRate() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getMatthewsCorrelationCoefficient(int, int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
 
getMax() - Method in class org.dllearner.utilities.statistics.Stat
 
getMaxClassDescriptionTests() - Method in class org.dllearner.algorithms.celoe.PCELOE
Deprecated.
getMaxClassDescriptionTests() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getMaxClassExpressionTests() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMaxClassExpressionTests() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMaxClassExpressionTestsAfterImprovement() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMaxClassExpressionTestsAfterImprovement() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMaxClassExpressionTestsWithoutImprovement() - Method in class org.dllearner.algorithms.celoe.PCELOE
Deprecated.
getMaxDepth() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMaxDepth() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMaxDepth() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getMaxDepth() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getMaxExecutionTimeInSeconds() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getMaxExecutionTimeInSeconds() - Method in class org.dllearner.core.AbstractCELA
 
getMaxExecutionTimeInSeconds() - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getMaxExecutionTimeInSecondsAfterImprovement() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMaxExecutionTimeInSecondsAfterImprovement() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMaxFetchedRows() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getMaximumAchievableScore(EvaluatedRDFResourceTree) - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeHeuristic
Returns the maximum achievable score according to the used score function.
getMaximumHorizontalExpansion() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMaximumHorizontalExpansion() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMaxLength() - Method in class org.dllearner.algorithms.NaiveALLearner
 
getMaxLevel() - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
getMaxModalDepth(OWLAxiom) - Static method in class org.dllearner.algorithms.pattern.MaximumModalDepthDetector
 
getMaxNrOfResults() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMaxNrOfResults() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMaxNrOfSplits() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getMaxSize() - Method in class org.dllearner.utilities.owl.EvaluatedDescriptionSet
 
getMean() - Method in class org.dllearner.utilities.statistics.Stat
Gets the mean of all numbers.
getMeanAsPercentage() - Method in class org.dllearner.utilities.statistics.Stat
Gets the mean of all numbers as percentage *100 so 0.5678 -> "56.78%"
getMessage() - Method in exception org.dllearner.parser.ParseException
This method has the standard behavior when this object has been created using the standard constructors.
getMessage() - Method in error org.dllearner.parser.TokenMgrError
You can also modify the body of this method to customize your error messages.
getMetaData(Object) - Method in interface org.dllearner.kb.repository.OntologyRepositoryEntry
Gets associated metadata.
getMetaDataKeys() - Method in class org.dllearner.kb.repository.bioportal.BioPortalRepository
 
getMetaDataKeys() - Method in class org.dllearner.kb.repository.LocalDirectoryOntologyRepository
 
getMetaDataKeys() - Method in class org.dllearner.kb.repository.lov.LOVRepository
 
getMetaDataKeys() - Method in interface org.dllearner.kb.repository.OntologyRepository
 
getMetaDataKeys() - Method in class org.dllearner.kb.repository.oxford.OxfordRepository
 
getMetaDataKeys() - Method in class org.dllearner.kb.repository.tones.TONESRepository
 
getMgi2goMappingsFilePath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getMgi2mpMappingsFilePath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getMin() - Method in class org.dllearner.utilities.statistics.Stat
 
getMinExecutionTimeInSeconds() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getMinimumHorizontalExpansion() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getMinimumHorizontalExpansion() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getMinVoteProportion() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getMode() - Method in class org.dllearner.kb.aquisitors.TupleAquisitor
 
getModel() - Method in class org.dllearner.kb.aquisitors.RDFBlankNode
getModel() - Method in class org.dllearner.kb.LocalModelBasedSparqlEndpointKS
 
getModel() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getModel(OWLOntology) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Converts an OWL API ontology into a JENA API model.
getModelDirPath() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getModifiedLengthScore(int) - Method in class org.dllearner.learningproblems.ScorePosNeg
The score of a concept depends on how good it classifies the examples of a learning problem and the length of the concept itself.
getModifiedLengthScore(int) - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getModifiedLengthScore(int) - Method in class org.dllearner.learningproblems.ScoreTwoValued
 
getMonitorPrefix(Class) - Static method in class org.dllearner.utilities.JamonMonitorLogger
 
getMonitors() - Static method in class org.dllearner.utilities.JamonMonitorLogger
 
getMoreGeneralRoles(OWLDataProperty) - Method in class org.dllearner.core.owl.DatatypePropertyHierarchy
 
getMoreGeneralRoles(OWLObjectProperty) - Method in class org.dllearner.core.owl.ObjectPropertyHierarchy
 
getMoreSpecialRoles(OWLDataProperty) - Method in class org.dllearner.core.owl.DatatypePropertyHierarchy
 
getMoreSpecialRoles(OWLObjectProperty) - Method in class org.dllearner.core.owl.ObjectPropertyHierarchy
 
getMostGeneralClasses() - Method in class org.dllearner.core.owl.ClassHierarchy
 
getMostGeneralClasses() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getMostGeneralDatatypeProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getMostGeneralDatatypeProperties() - Method in interface org.dllearner.core.SchemaReasoner
 
getMostGeneralDescriptions(boolean) - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree
 
getMostGeneralEntities() - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getMostGeneralProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getMostGeneralProperties() - Method in interface org.dllearner.core.SchemaReasoner
TODO Outdated in OWL 2, because the universal role is the most general.
getMostGeneralRoles() - Method in class org.dllearner.core.owl.DatatypePropertyHierarchy
 
getMostGeneralRoles() - Method in class org.dllearner.core.owl.ObjectPropertyHierarchy
 
getMostSpecialDatatypeProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getMostSpecialDatatypeProperties() - Method in interface org.dllearner.core.SchemaReasoner
 
getMostSpecialEntities() - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getMostSpecialProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getMostSpecialProperties() - Method in interface org.dllearner.core.SchemaReasoner
TODO Outdated in OWL, because the bottom role is the most specific.
getMostSpecialRoles() - Method in class org.dllearner.core.owl.DatatypePropertyHierarchy
 
getMostSpecialRoles() - Method in class org.dllearner.core.owl.ObjectPropertyHierarchy
 
getMostSpecificClasses() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getMostSpecificTypes(OWLIndividual) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getMpKBFilePath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getName(Class<? extends Component>) - Static method in class org.dllearner.core.AnnComponentManager
Returns the name of a DL-Learner component.
getName(Component) - Static method in class org.dllearner.core.AnnComponentManager
Returns the name of a DL-Learner component.
getName(Field) - Static method in class org.dllearner.core.AnnComponentManager
Returns the name of a config option
getName() - Method in enum org.dllearner.core.StringRenderer.Rendering
 
getName() - Method in class org.dllearner.kb.repository.bioportal.BioPortalRepository
 
getName() - Method in class org.dllearner.kb.repository.LocalDirectoryOntologyRepository
 
getName() - Method in class org.dllearner.kb.repository.lov.LOVRepository
 
getName() - Method in interface org.dllearner.kb.repository.OntologyRepository
Gets the name of the repository
getName() - Method in class org.dllearner.kb.repository.oxford.OxfordRepository
 
getName() - Method in class org.dllearner.kb.repository.tones.TONESRepository
 
getName() - Method in class org.dllearner.prolog.Atom
 
getName() - Method in class org.dllearner.prolog.Function
 
getName() - Method in class org.dllearner.prolog.FunctionDefinition
 
getName() - Method in class org.dllearner.prolog.PredicateDefinition
 
getName() - Method in class org.dllearner.prolog.PrologConstant
 
getName() - Method in class org.dllearner.prolog.Variable
 
getNamedGraphURIs() - Method in class org.dllearner.kb.OWLFile
 
getNamedGraphURIs() - Method in class org.dllearner.kb.sparql.SparqlEndpoint
 
getNamedGraphURIs() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getNamedGraphURIs() - Method in class org.dllearner.kb.SparqlEndpointKS
 
getNaturalLanguage() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getNBR(RDFResourceTree, RDFResourceTree) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.NBRGenerator
 
getNBR(RDFResourceTree, List<RDFResourceTree>) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.NBRGenerator
 
getNBR(RDFResourceTree, RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.operations.nbr.NBRGeneratorImpl
 
getNBR(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.NBRGeneratorImpl
 
getNBRs(RDFResourceTree, RDFResourceTree) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.NBRGenerator
 
getNBRs(RDFResourceTree, List<RDFResourceTree>) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.NBRGenerator
 
getNBRs(RDFResourceTree, RDFResourceTree, int) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.NBRGenerator
 
getNBRs(RDFResourceTree, List<RDFResourceTree>, int) - Method in interface org.dllearner.algorithms.qtl.operations.nbr.NBRGenerator
 
getNBRs(RDFResourceTree, RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.operations.nbr.NBRGeneratorImpl
 
getNBRs(RDFResourceTree, List<RDFResourceTree>) - Method in class org.dllearner.algorithms.qtl.operations.nbr.NBRGeneratorImpl
 
getNBRs(RDFResourceTree, RDFResourceTree, int) - Method in class org.dllearner.algorithms.qtl.operations.nbr.NBRGeneratorImpl
 
getNBRs(RDFResourceTree, List<RDFResourceTree>, int) - Method in class org.dllearner.algorithms.qtl.operations.nbr.NBRGeneratorImpl
 
getNeg() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
getNegationPenalty() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNegationPenalty() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getNegativeExamples(EvaluatedAxiom<OWLDataPropertyDomainAxiom>) - Method in class org.dllearner.algorithms.properties.DataPropertyDomainAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.algorithms.properties.DataPropertyHierarchyAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<OWLDataPropertyRangeAxiom>) - Method in class org.dllearner.algorithms.properties.DataPropertyRangeAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<OWLFunctionalObjectPropertyAxiom>) - Method in class org.dllearner.algorithms.properties.FunctionalObjectPropertyAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<OWLInverseFunctionalObjectPropertyAxiom>) - Method in class org.dllearner.algorithms.properties.InverseFunctionalObjectPropertyAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<OWLObjectPropertyDomainAxiom>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyDomainAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyHierarchyAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<OWLObjectPropertyRangeAxiom>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyRangeAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<OWLTransitiveObjectPropertyAxiom>) - Method in class org.dllearner.algorithms.properties.TransitiveObjectPropertyAxiomLearner
 
getNegativeExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getNegativeExamples() - Method in class org.dllearner.kb.sparql.ClassBasedSampleGenerator
 
getNegativeExamples() - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getNegativeExamples() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getNegativeExamples() - Method in class org.dllearner.learningproblems.FuzzyPosNegLP
 
getNegativeExamples() - Method in class org.dllearner.learningproblems.PosNegLP
 
getNegativeExamples() - Method in class org.dllearner.learningproblems.PosNegUndLP
 
getNegativeExamples(int, boolean) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderOWL
see getNegativeExamples(int neglimit, boolean stable )
getNegativeExamples(int, boolean, boolean) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderOWL
aggregates all collected neg examples CAVE: it is necessary to call one of the make functions before calling this OTHERWISE it will choose random examples
getNegativeExamples(int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL
see getNegativeExamples(int neglimit, boolean stable )
getNegativeExamples(int, boolean) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL
aggregates all collected neg examples CAVE: it is necessary to call one of the make functions before calling this OTHERWISE it will choose random examples
getNegativeExamples(OWLClass, Set<OWLIndividual>, int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
getNegativeExamples(OWLClass, Set<OWLIndividual>, Collection<AutomaticNegativeExampleFinderSPARQL2.Strategy>, int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
getNegativeExamples(OWLClass, Set<OWLIndividual>, Map<AutomaticNegativeExampleFinderSPARQL2.Strategy, Double>, int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
getNegativeExamples(Set<OWLIndividual>, int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
getNegativeExamples(Set<OWLIndividual>, Collection<AutomaticNegativeExampleFinderSPARQL2.Strategy>, int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
getNegativeExamples(Set<OWLIndividual>, Map<AutomaticNegativeExampleFinderSPARQL2.Strategy, Double>, int) - Method in class org.dllearner.utilities.examples.AutomaticNegativeExampleFinderSPARQL2
 
getNegativeExamples() - Method in class org.dllearner.utilities.examples.ExampleContainer
 
getNegativeInstances(String) - Method in class org.dllearner.core.owl.FlatABox
 
getNegativeRandomCount() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getNegatives(AxiomType<? extends OWLAxiom>, EvaluatedAxiom<OWLAxiom>) - Method in class org.dllearner.algorithms.properties.MultiPropertyAxiomLearner
 
getNegativeWeight() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNegativeWeight() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getNegClassCandidates(OWLClassExpression) - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getNegClassified() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getNegSet() - Method in class org.dllearner.utilities.datastructures.SortedSetTuple
 
getNegSubTree() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
 
getNegSubTree() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getNegWeight() - Method in class org.dllearner.learningproblems.AccMethodFMeasureWeighted
 
getNegWeight() - Method in class org.dllearner.learningproblems.AccMethodPredAccWeighted
 
getNeutralExamples() - Method in class org.dllearner.learningproblems.PosNegLPStrict
 
getNextGlobalBNodeId() - Static method in class org.dllearner.kb.aquisitors.BlankNodeCollector
 
getNextNodeToExpand() - Method in class org.dllearner.core.ref.ALCLearningAlgorithm
 
getNextNodeToExpand() - Method in class org.dllearner.core.ref.RefinementOperatorBasedLearningAlgorithmBase
 
getNextToken() - Method in class org.dllearner.parser.KBParser
Get the next Token.
getNextToken() - Method in class org.dllearner.parser.KBParserTokenManager
Get the next Token.
getNextToken() - Method in class org.dllearner.parser.PrologParser
Get the next Token.
getNextToken() - Method in class org.dllearner.parser.PrologParserTokenManager
Get the next Token.
getNiceDescription(OWLClassExpression) - Method in class org.dllearner.core.AbstractCELA
The goal of this method is to rewrite the class expression CE, to get a more informative one by e.g.
getNode() - Method in class org.dllearner.algorithms.el.ELDescriptionEdge
 
getNode(int[]) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
Gets the node at the given position.
getNode() - Method in class org.dllearner.algorithms.qtl.datastructures.NodeInv
 
getNodeById(int) - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getNodeById(int) - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getNodeChildPenalty() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNodeId() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeChange
 
getNodeRefinementPenalty() - Method in class org.dllearner.algorithms.celoe.OEHeuristicRuntime
 
getNodes() - Method in class org.dllearner.algorithms.el.ELDescriptionTree
 
getNodes(RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns all nodes in the given query tree.
getNodes() - Method in class org.dllearner.core.ref.SearchTree
 
getNodeScore(OENode) - Method in class org.dllearner.algorithms.celoe.OEHeuristicRuntime
 
getNodeScore(ExampleBasedNode) - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNodeScore(ExampleBasedNode, int, int, double, double, double, int) - Static method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNodeScore(OENode) - Method in class org.dllearner.core.AbstractHeuristic
 
getNodeSet() - Method in class org.dllearner.utilities.datastructures.AbstractSearchTree
 
getNodesOnLevel(int) - Method in class org.dllearner.algorithms.el.ELDescriptionTree
Gets the nodes on a specific level of the tree.
getNodeType() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getNodeType() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getNoisePercentage() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getNoisePercentage() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getNoisePercentage() - Method in class org.dllearner.algorithms.el.ELLearningAlgorithm
 
getNoisePercentage() - Method in class org.dllearner.algorithms.el.ELLearningAlgorithmDisjunctive
 
getNoisePercentage() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getNonEmptyOWLClasses() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getNonSpecificityMeasureValue() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
getNotCoveredInstances() - Method in class org.dllearner.learningproblems.ClassScore
 
getNotCoveredInstances() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionClass
 
getNotCoveredNegatives() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
 
getNotCoveredNegatives() - Method in class org.dllearner.learningproblems.QueryTreeScore
 
getNotCoveredNegatives() - Method in class org.dllearner.learningproblems.ScorePosNeg
 
getNotCoveredNegatives() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getNotCoveredNegatives() - Method in class org.dllearner.learningproblems.ScoreTwoValued
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosNeg
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.EvaluatedDescriptionPosOnly
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.QueryTreeScore
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.ScorePosNeg
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.ScorePosOnly
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getNotCoveredPositives() - Method in class org.dllearner.learningproblems.ScoreTwoValued
 
getNrOfEdges(RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns the number of edges that occur in the given query tree, which is obviously `n-1` where n is the number of nodes.
getNrOfExamples() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNrOfExtractedAxioms() - Method in class org.dllearner.kb.extraction.OWLAPIOntologyCollector
 
getNrOfExtractedAxioms() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getNrOfExtractedTriples() - Method in class org.dllearner.kb.extraction.Manager
Deprecated.
getNrOfInstanceChecks() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNrOfMultiInstanceChecks() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNrOfMultiSubsumptionChecks() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNrOfNegativeExamples() - Method in class org.dllearner.algorithms.ocel.FlexibleHeuristic
 
getNrOfNegativeExamples() - Method in class org.dllearner.algorithms.ocel.MultiHeuristic
 
getNrOfNegativeExamples() - Method in class org.dllearner.learningproblems.AxiomScore
 
getNrOfNodes(RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns the number of nodes in the given query tree, i.e.
getNrOfPositiveExamples() - Method in class org.dllearner.learningproblems.AxiomScore
 
getNrOfRequests() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getNrOfRetrievals() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNrOfSubsumptionChecks() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNrOfSubsumptionHierarchyQueries() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNrOfThreads() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getNTriple(String) - Method in class org.dllearner.utilities.datastructures.RDFNodeTuple
 
getNTripleForAllExtractedNodes() - Method in class org.dllearner.kb.extraction.Manager
 
getNTripleForm() - Method in class org.dllearner.kb.extraction.BlankNode
 
getNTripleForm() - Method in class org.dllearner.kb.extraction.LiteralNode
 
getNTripleForm() - Method in class org.dllearner.kb.extraction.Node
 
getNTripleFormOfB() - Method in class org.dllearner.kb.extraction.DatatypePropertyNode
 
getNTripleForNodes(List<Node>) - Method in class org.dllearner.kb.extraction.Manager
 
getNu() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getNumberOfChildren() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
getNumberOfRows() - Method in class org.dllearner.utilities.statistics.Table
 
getNumericDataProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNumericDataProperties() - Method in interface org.dllearner.core.BaseReasoner
Gets all data properties with a numeric range
getNumericDataPropertiesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNumericDatatypeMembers(OWLDataProperty, Class<T>) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNumericDatatypeMembers(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNumericDatatypeMembers(OWLDataProperty, Class<T>) - Method in interface org.dllearner.core.IndividualReasoner
Convenience method, which can be used if it is known that the property has values which can be parsed as given Number class.
getNumericDatatypeMembers(OWLDataProperty) - Method in interface org.dllearner.core.IndividualReasoner
Computes and returns all connections between individuals and numeric values through the specified property, e.g.
getNumericDatatypeMembersImpl(OWLDataProperty, Class<T>) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getNumericDatatypeMembersImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObject() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeChange
 
getObject() - Method in class org.dllearner.algorithms.qtl.filters.QuestionBasedStatementSelector
 
getObjectAllValuesFromName(OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectAllValuesFromName(OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectAllValuesLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectCardinalityLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectComplementLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectComplementOfName(OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectComplementOfName(OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectCountForProperty(OWLObjectProperty, long, TimeUnit) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectCountForProperty(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectExactCardinalityRestrictionName(int, OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectExactCardinalityRestrictionName(int, OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectExactCardinalityRestrictionName(int, OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectExactCardinalityRestrictionName(int, OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectFilterList() - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getObjectHasSelfName(OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectHasSelfName(OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectHasValueLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectHasValueName(OWLObjectPropertyExpression, OWLIndividual) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectHasValueName(OWLObjectPropertyExpression, OWLIndividual) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectIntersectionLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectIntersectionOfName(Set<OWLClassExpression>) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectIntersectionOfName(Set<OWLClassExpression>) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectInverseLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectMaxCardinalityRestrictionName(int, OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectMaxCardinalityRestrictionName(int, OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectMaxCardinalityRestrictionName(int, OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectMaxCardinalityRestrictionName(int, OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectMinCardinalityRestrictionName(int, OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectMinCardinalityRestrictionName(int, OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectMinCardinalityRestrictionName(int, OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectMinCardinalityRestrictionName(int, OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectOneOfLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectOneOfName(Set<OWLIndividual>) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectOneOfName(Set<OWLIndividual>) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectProperties() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectProperties() - Method in interface org.dllearner.core.BaseReasoner
Gets all object properties in the knowledge base, e.g.
getObjectProperties() - Method in class org.dllearner.kb.extraction.InstanceNode
 
getObjectProperties(OWLClass) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectPropertiesImpl() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectPropertiesImpl() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getObjectPropertiesImpl() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getObjectPropertiesImpl() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectPropertiesWithDomain(OWLClass) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectPropertyDomains() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectPropertyDomains() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectPropertyDomains(OWLObjectPropertyExpression, boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getObjectPropertyHierarchy() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectPropertyHierarchy() - Method in interface org.dllearner.core.SchemaReasoner
Computes and returns the object property hierarchy of the knowledge base.
getObjectPropertyHierarchy() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getObjectPropertyName(OWLObjectPropertyExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
Gets a String representation of an OWL 2 object property.
getObjectPropertyRanges() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectPropertyRanges() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectPropertyRanges(OWLObjectPropertyExpression, boolean) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getObjectPropertyRelationships(OWLIndividual) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectPropertyRelationships(OWLIndividual) - Method in interface org.dllearner.core.IndividualReasoner
A map of properties related to an individual, e.g.
getObjectPropertyRelationshipsImpl(OWLIndividual) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getObjectPropertyRelationshipsImpl(OWLIndividual) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getObjectPropertyRelationshipsImpl(OWLIndividual) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getObjectPropertyRelationshipsImpl(OWLIndividual) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getObjectPropertyValues(OWLNamedIndividual, OWLObjectPropertyExpression) - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getObjectProperyLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectSomeValuesFromName(OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectSomeValuesFromName(OWLObjectPropertyExpression, OWLClassExpression) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectSomeValuesLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectUnionLength() - Method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getObjectUnionOfName(Set<OWLClassExpression>) - Method in class org.dllearner.utilities.FuzzyOwl2
 
getObjectUnionOfName(Set<OWLClassExpression>) - Method in class org.dllearner.utilities.FuzzyOwl2toFuzzyDL
 
getObjectVariables(Query) - Method in class org.dllearner.utilities.QueryUtils
Returns all variables that occur as subject in a triple pattern of the SPARQL query.
getObjectVars(Query) - Static method in class org.dllearner.utilities.QueryUtils
Returns all variables that occur as object in a triple pattern of the SPARQL query.
getObjList() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getOboFoundryId() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getObsoleteParent() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getObsoleteProperty() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getOCELMetric() - Static method in class org.dllearner.utilities.owl.OWLClassExpressionLengthMetric
 
getOmission() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
getOmission() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getOmmissionErrorRate() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getOneVsAllMode() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getOneVsAllThreshold() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getOntology() - Method in class org.dllearner.kb.OWLAPIOntology
 
getOntology() - Method in class org.dllearner.reasoning.OWLAPIReasoner
Gets the internal OWL API ontology.
getOntologyBeans() - Method in class org.dllearner.kb.repository.bioportal.Data
 
getOntologyFilePath() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getOntologyFragmentURL() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getOntologyId() - Method in class org.dllearner.kb.repository.bioportal.OntologyAclEntry
 
getOntologyId() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getOntologyRepositories() - Method in class org.dllearner.kb.repository.OntologyRepositoryManager
 
getOntologySchemaUrls() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getOntologyShortName() - Method in interface org.dllearner.kb.repository.OntologyRepositoryEntry
Gets a short human readable name for this entry
getOntologyURI() - Method in interface org.dllearner.kb.repository.OntologyRepositoryEntry
Gets the URI of the ontology that is described by this entry.
getOperands() - Method in class org.dllearner.core.owl.OWLNaryBooleanClassExpressionImplExt
 
getOperandsAsList() - Method in class org.dllearner.core.owl.OWLNaryBooleanClassExpressionImplExt
 
getOperator() - Method in class org.dllearner.algorithms.celoe.CELOE
 
getOperator() - Method in class org.dllearner.algorithms.celoe.PCELOE
 
getOperator() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getOperator() - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
getOperator() - Method in class org.dllearner.algorithms.ocel.OCEL
 
getOperator() - Method in class org.dllearner.refinementoperators.OperatorInverter
 
getOptimalCBDStructure(Query) - Static method in class org.dllearner.utilities.QueryUtils
 
getOptionalCount() - Method in class org.dllearner.utilities.QueryUtils
 
getOptionalTriplePatterns() - Method in class org.dllearner.utilities.QueryUtils
 
getOrderedBySubsumptionAndAccuracy(boolean) - Method in class org.dllearner.utilities.datastructures.DescriptionSubsumptionTree.Node
 
getOut() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getOutgoingTriplePatterns(Query, Node) - Static method in class org.dllearner.utilities.QueryUtils
Given a SPARQL query and a start node, return the outgoing triple patterns.
getOutSC1() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getOutSC2() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getOverallReasoningTimeNs() - Method in class org.dllearner.core.AbstractReasonerComponent
 
getOWLAnnotationProperty(String) - Method in class org.dllearner.utilities.owl.SimpleOWLEntityChecker
 
getOwlAPIOntologyCollector() - Method in class org.dllearner.kb.extraction.Configuration
 
getOWLAPIOntologyForNodes(List<Node>, boolean) - Method in class org.dllearner.kb.extraction.Manager
 
getOWLClass(String) - Method in class org.dllearner.utilities.owl.SimpleOWLEntityChecker
 
getOWLClasses() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOWLClasses(String) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOWLDataProperties() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOWLDataProperties(String) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOWLDataProperty(String) - Method in class org.dllearner.utilities.owl.SimpleOWLEntityChecker
 
getOWLDatatype(String) - Method in class org.dllearner.utilities.owl.SimpleOWLEntityChecker
 
getOWLEntityType(String) - Method in class org.dllearner.reasoning.SPARQLReasoner
Returns the entity type of the given resource IRI, i.e.
getOWLIndividual(String) - Method in class org.dllearner.utilities.owl.SimpleOWLEntityChecker
 
getOWLIndividuals() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOwlLinkURL() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getOWLLiteral(Literal) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Converts a JENA API literal into an OWL API literal.
getOWLLiteral(LiteralLabel) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Converts a JENA API literal into an OWL API literal.
getOWLObjectProperties() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOWLObjectProperties(String) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getOWLObjectProperty(String) - Method in class org.dllearner.utilities.owl.SimpleOWLEntityChecker
 
getOWLOntology(Model) - Static method in class org.dllearner.utilities.OwlApiJenaUtils
Converts a JENA API model into an OWL API ontology.
getP() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getParallelClasses(String, int) - Method in class org.dllearner.kb.sparql.SPARQLTasks
 
getParent() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getParent() - Method in class org.dllearner.algorithms.gp.OWLClassExpressionTree
 
getParent() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GenericTree
 
getParent() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getParent() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getParent() - Method in class org.dllearner.core.AbstractSearchTreeNode
 
getParent() - Method in class org.dllearner.core.owl.ContextDescription
 
getParent() - Method in interface org.dllearner.core.ref.SearchTreeNode
 
getParent() - Method in class org.dllearner.core.ref.SearchTreeNodeSimple
 
getParentEdge() - Method in class org.dllearner.algorithms.el.ELDescriptionNode
 
getParentIDs() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.EvaluatedRDFResourceTree
 
getParentIDs() - Method in class org.dllearner.algorithms.qtl.operations.lgg.EvaluatedQueryTree
 
getParents(T) - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getParents(T, boolean) - Method in class org.dllearner.core.owl.AbstractHierarchy
 
getParents(T) - Method in interface org.dllearner.core.owl.Hierarchy
 
getParents(T, boolean) - Method in interface org.dllearner.core.owl.Hierarchy
 
getPathsToLeafs(GenericTree<T, V>) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns all paths to leaf nodes.
getPathToRoot() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.QueryTreeImpl
 
getPathToRoot() - Method in interface org.dllearner.algorithms.qtl.datastructures.QueryTree
 
getPathToRoot(RDFResourceTree, RDFResourceTree) - Static method in class org.dllearner.algorithms.qtl.QueryTreeUtils
Returns the path from the given node to the root of the given tree, i.e.
getPdCache() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPdCacheHits() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPdRequests() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPercentPerLengthUnit() - Method in class org.dllearner.algorithms.ocel.FlexibleHeuristic
 
getPercentPerLengthUnit() - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getPercentPerLengthUnit() - Method in class org.dllearner.learningproblems.FuzzyPosNegLP
 
getPercentPerLengthUnit() - Method in class org.dllearner.learningproblems.PosNegLP
 
getPersistantCacheDir() - Static method in class org.dllearner.kb.sparql.Cache
a more persistant cache used for example generation."cachePersistant"
getPersistentCache() - Static method in class org.dllearner.kb.sparql.Cache
A Persistant cache is stored in the folder cachePersistant.
getPF_ITF(OWLIndividual, OWLProperty, boolean) - Method in class org.dllearner.algorithms.qtl.util.InformativenessMeasures
 
getPhysicalIRI() - Method in class org.dllearner.kb.extraction.OWLAPIOntologyCollector
 
getPhysicalOntologyURL() - Method in class org.dllearner.kb.extraction.Manager
 
getPhysicalURI() - Method in interface org.dllearner.kb.repository.OntologyRepositoryEntry
Gets the physical URI of the ontology that is described by this entry.
getPignisticTransformation(List<T>) - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
getPopularity(T) - Method in class org.dllearner.reasoning.SPARQLReasoner
Computes the popularity of the given entity.
getPopularityOf(OWLClassExpression) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getPos() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.AbstractTree
 
getPosClassified() - Method in class org.dllearner.learningproblems.ScoreThreeValued
 
getPosExamples() - Method in class org.dllearner.utilities.examples.AutomaticPositiveExampleFinderOWL
 
getPosExamples() - Method in class org.dllearner.utilities.examples.AutomaticPositiveExampleFinderSPARQL
 
getPositiveExamples(EvaluatedAxiom<OWLDataPropertyDomainAxiom>) - Method in class org.dllearner.algorithms.properties.DataPropertyDomainAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.algorithms.properties.DataPropertyHierarchyAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<OWLDataPropertyRangeAxiom>) - Method in class org.dllearner.algorithms.properties.DataPropertyRangeAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<OWLObjectPropertyDomainAxiom>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyDomainAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyHierarchyAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<OWLObjectPropertyRangeAxiom>) - Method in class org.dllearner.algorithms.properties.ObjectPropertyRangeAxiomLearner
 
getPositiveExamples(EvaluatedAxiom<T>) - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getPositiveExamples() - Method in class org.dllearner.kb.sparql.ClassBasedSampleGenerator
 
getPositiveExamples() - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getPositiveExamples() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getPositiveExamples() - Method in class org.dllearner.learningproblems.FuzzyPosNegLP
 
getPositiveExamples() - Method in class org.dllearner.learningproblems.PosNegLP
 
getPositiveExamples() - Method in class org.dllearner.learningproblems.PosNegUndLP
 
getPositiveExamples() - Method in class org.dllearner.learningproblems.PosOnlyLP
 
getPositiveExamples() - Method in class org.dllearner.utilities.examples.ExampleContainer
 
getPositiveExamplesFrequency() - Method in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
getPositiveExamplesFrequency(Model) - Method in class org.dllearner.algorithms.properties.ObjectPropertyCharacteristicsAxiomLearner
 
getPositiveInstances(String) - Method in class org.dllearner.core.owl.FlatABox
 
getPositiveRandomCount() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getPositives(AxiomType<? extends OWLAxiom>, EvaluatedAxiom<OWLAxiom>) - Method in class org.dllearner.algorithms.properties.MultiPropertyAxiomLearner
 
getPosNegExampleRatio() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getPosNegLP() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getPosNegLP() - Method in class org.dllearner.learningproblems.PosNegUndLP
A method for binarizing a ternary learning problem.
getPosOnlyLP() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getPosSet() - Method in class org.dllearner.utilities.datastructures.SortedSetTuple
 
getPosSubTree() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.models.DSTDLTree
 
getPosSubTree() - Method in class org.dllearner.algorithms.decisiontrees.tdt.model.DLTree
 
getPostLGG() - Method in class org.dllearner.algorithms.qtl.operations.NBR
 
getPosWeight() - Method in class org.dllearner.learningproblems.AccMethodFMeasureWeighted
 
getPosWeight() - Method in class org.dllearner.learningproblems.AccMethodPredAccWeighted
 
getPrecomputableInferenceTypes() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getPredAccApproximation(int, int, double, int, int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
 
getPredAccuracyOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.ClassAsInstanceLearningProblem
 
getPredAccuracyOrTooWeakExact(OWLClassExpression, double) - Method in class org.dllearner.learningproblems.FuzzyPosNegLPStandard
 
getPredefinedEndpoint() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getPredefinedFilter() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getPredefinedManipulator() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getPredefinedSPARQLTasksWithCache(String) - Static method in class org.dllearner.kb.sparql.SPARQLTasks
 
getPredicate() - Method in class org.dllearner.algorithms.qtl.filters.QuestionBasedStatementSelector
 
getPredicateFilterList() - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getPredicateFilters() - Method in class org.dllearner.algorithms.qtl.util.SPARQLEndpointEx
 
getPredicateFrequency(OWLIndividual, OWLProperty, boolean) - Method in class org.dllearner.algorithms.qtl.util.InformativenessMeasures
Predicate Frequency(PF) quantifies the informativeness of a predicate p in the context of a URI u.
getPredicateNode(IRI) - Method in class org.dllearner.utilities.owl.OWL2SPARULConverter
 
getPredicateObjectFilterList() - Method in class org.dllearner.kb.sparql.SparqlQueryMaker
 
getPredictionDataDirPath() - Method in class org.dllearner.algorithms.semkernel.SemKernel
 
getPredictionInputDirectoryPath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getPredictionOutputDirectoryPath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getPredictionURIsFilePath() - Method in class org.dllearner.utilities.semkernel.MPSemKernelWorkflow
 
getPredictiveAccuracy(int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
 
getPredictiveAccuracy(int, int, int, int, double) - Static method in class org.dllearner.learningproblems.Heuristics
 
getPredictiveAccuracy2(int, int, int) - Static method in class org.dllearner.learningproblems.Heuristics
 
getPredictiveAccuracy2(int, int, int, int, double) - Static method in class org.dllearner.learningproblems.Heuristics
 
getPredList() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getPreferredMaximumSubclassLimit() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getPreferredNameSlot() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getPrefix() - Method in class org.dllearner.algorithms.qtl.util.SPARQLEndpointEx
 
getPrefixes() - Static method in class org.dllearner.algorithms.qtl.util.Prefixes
 
getPrefixes() - Method in class org.dllearner.algorithms.qtl.util.SPARQLEndpointEx
 
getPrefixes() - Method in interface org.dllearner.core.BaseReasoner
Returns the prefixes used in the knowledge base, e.g.
getPrefixes() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getPrefixes() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getPrefixes() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getPrintName(EntityType) - Static method in class org.dllearner.utilities.OWLAPIUtils
 
getProblem() - Method in class org.dllearner.algorithms.decisiontrees.heuristics.TreeInductionHeuristics
 
getProperties(boolean, String) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getProperties(boolean) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getPropertyCount(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getPropertyFrequency(String) - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeInformativeness
 
getPropertyMembers(OWLObjectProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getPropertyMembers(OWLObjectProperty) - Method in interface org.dllearner.core.IndividualReasoner
Computes and returns all connections between individuals through the specified property, e.g.
getPropertyMembersImpl(OWLObjectProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getPropertyMembersImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getPropertyMembersImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getPropertyMembersImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getPropertyPopularity() - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
getPropertyPopularity(Model) - Method in class org.dllearner.algorithms.properties.PropertyAxiomLearner
 
getPsiApplicationTimeNs() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPsiReasoningTimeNs() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPublication() - Method in class org.dllearner.kb.repository.bioportal.OntologyBean
 
getPuCache() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPuCacheHits() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPunningClasses(OWLOntology) - Static method in class org.dllearner.utilities.owl.OWLPunningDetector
Returns the classes of the ontology that are also used as individuals, i.e.
getPunningIRIs(OWLOntology) - Static method in class org.dllearner.utilities.owl.OWLPunningDetector
Returns the classes of the ontology that are also used as individuals, i.e.
getPuRequests() - Method in class org.dllearner.algorithms.hybridgp.Psi
 
getPuritythreshold() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.DSTTDTClassifier
 
getPuritythreshold() - Method in class org.dllearner.algorithms.decisiontrees.tdt.AbstractTDTClassifier
 
getPurlFilterProperties() - Static method in class org.dllearner.algorithms.qtl.filters.Filters
 
getQuality() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getQualityEvaluationMethod() - Method in class org.dllearner.algorithms.ocel.ExampleBasedNode
 
getQuery() - Method in class org.dllearner.algorithms.qtl.operations.NBR
 
getQueryExecutionFactory() - Method in class org.dllearner.kb.SparqlEndpointKS
 
getQueryExecutionFactory() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getQueryTree() - Method in class org.dllearner.algorithms.qtl.datastructures.impl.GeneralisedQueryTree
 
getQueryTree(String, Model) - Method in interface org.dllearner.algorithms.qtl.impl.QueryTreeFactory
Generates a query tree with the given resource as root and the edges based on the data contained in the model.
getQueryTree(Resource, Model) - Method in interface org.dllearner.algorithms.qtl.impl.QueryTreeFactory
Generates a query tree with the given resource as root and the edges based on the data contained in the model.
getQueryTree(String, Model, int) - Method in interface org.dllearner.algorithms.qtl.impl.QueryTreeFactory
Generates a query tree with the given resource as root and the edges based on the data contained in the model.
getQueryTree(Resource, Model, int) - Method in interface org.dllearner.algorithms.qtl.impl.QueryTreeFactory
Generates a query tree with the given resource as root and the edges based on the data contained in the model.
getQueryTree(Resource, Model, int) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryBase
 
getQueryTree(Resource, Model, int) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryBaseInv
 
getQueryTree(String, Model, int) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryCache
 
getQueryTree(Resource, Model, int) - Method in class org.dllearner.algorithms.qtl.impl.QueryTreeFactoryCache
 
getQueryTree() - Method in class org.dllearner.algorithms.qtl.util.QueryTreePoint
 
getQueryTreeInformativeness(RDFResourceTree) - Method in class org.dllearner.algorithms.qtl.heuristics.QueryTreeInformativeness
 
getQuestion(QueryTree<N>, List<QueryTree<N>>, List<String>) - Method in class org.dllearner.algorithms.qtl.operations.NBR
 
getQuestionWords() - Method in class org.dllearner.algorithms.qtl.filters.KeywordBasedQueryTreeFilter
 
getRandomConcept() - Method in class org.dllearner.algorithms.decisiontrees.refinementoperators.DLTreesRefinementOperator
Random concept generation
getRandomnessMeasure() - Method in class org.dllearner.algorithms.decisiontrees.dsttdt.dst.MassFunction
 
getRandomSeed() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getRange(OWLObjectProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getRange(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getRange(OWLObjectProperty) - Method in interface org.dllearner.core.SchemaReasoner
Returns the range of this object property.
getRange(OWLDataProperty) - Method in interface org.dllearner.core.SchemaReasoner
Returns the range of this data property.
getRangeImpl(OWLObjectProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getRangeImpl(OWLDataProperty) - Method in class org.dllearner.core.AbstractReasonerComponent
 
getRangeImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getRangeImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getRangeImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getRangeImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getRangeImpl(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getRangeImpl(OWLDataProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getRangeInstances(String, int) - Method in class org.dllearner.kb.sparql.SPARQLTasks
Returns all instances that are fillers of the property/role.
getRanges(OWLObjectProperty) - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getRDFSFilterProperties() - Static method in class org.dllearner.algorithms.qtl.filters.Filters
 
getReasoner() - Method in class org.dllearner.algorithms.decisiontrees.heuristics.TreeInductionHeuristics
 
getReasoner() - Method in class org.dllearner.core.AbstractAxiomLearningAlgorithm
 
getReasoner() - Method in class org.dllearner.core.AbstractCELA
The reasoning service variable, which must be used by all learning algorithm implementations.
getReasoner() - Method in class org.dllearner.core.AbstractLearningProblem
Implementations of learning problems can use this class variable to perform reasoner operations.
getReasoner() - Method in class org.dllearner.reasoning.OWLAPIReasoner
Gets the internal OWL API reasoner.
getReasoner() - Method in class org.dllearner.refinementoperators.RhoDRDown
 
getReasoner() - Method in class org.dllearner.utilities.ReasoningUtils
 
getReasonerComponent() - Method in class org.dllearner.learningproblems.ExampleLoader
 
getReasonerComponent() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getReasonerName() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getReasonerType() - Method in class org.dllearner.core.AbstractReasonerComponent
Gets the type of the underlying reasoner.
getReasonerType() - Method in class org.dllearner.reasoning.ClosedWorldReasoner
 
getReasonerType() - Method in class org.dllearner.reasoning.OWLAPIReasoner
 
getReasonerType() - Method in class org.dllearner.reasoning.SPARQLReasoner
 
getReasonerVersion() - Method in class org.dllearner.reasoning.StructuralReasonerExtended
 
getReasoning() - Method in class org.dllearner.kb.OWLFile
 
getReasoningString() - Method in class org.dllearner.kb.OWLFile
 
getReasoningUtil() - Method in class org.dllearner.core.AbstractClassExpressionLearningProblem
 
getRecall(OWLClassExpression) - Method in class org.dllearner.learningproblems.ClassLearningProblem
 
getRecursiondepth() - Method in class org.dllearner.kb.extraction.Configuration
 
getRecursionDepth() - Method in class org.dllearner.kb.sparql.simple.SparqlSimpleExtractor
 
getRecursionDepth() - Method in class org.dllearner.kb.sparql.SparqlKnowledgeSource
 
getRefinementChainString(AbstractSearchTreeNode<? extends AbstractSearchTreeNode>) - Static method in class org.dllearner.utilities.TreeUtils
 
getRefinementCount() - Method in class org.dllearner.algorithms.celoe.OENode