org.dllearner.kb.repository.bioportal

Class BioPortalRepository

java.lang.Object

org.dllearner.kb.repository.bioportal.BioPortalRepository

All Implemented Interfaces:

OntologyRepository

public class BioPortalRepository
extends Object
implements OntologyRepository

Constructor Summary

Constructors

Constructor and Description
BioPortalRepository()

Method Summary

Modifier and Type	Method and Description
void	download(File dir) Download the ontologies and save them in the given directory.
Collection<OntologyRepositoryEntry>	getEntries()
String	getLocation() Gets a OWLClassExpression of the location of the repository
List<Object>	getMetaDataKeys()
String	getName() Gets the name of the repository
org.semanticweb.owlapi.model.OWLOntology	getOntology(OntologyRepositoryEntry entry) Returns the ontology for the entry.
void	initialize()
static void	main(String[] args)
void	refresh() Ensures the repository is up to date

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BioPortalRepository

public BioPortalRepository()

Method Detail

getName

public String getName()

Description copied from interface: OntologyRepository

Gets the name of the repository

Specified by:

getName in interface OntologyRepository

Returns:

A short name for the repository

getLocation

public String getLocation()

Description copied from interface: OntologyRepository

Gets a OWLClassExpression of the location of the repository

Specified by:

getLocation in interface OntologyRepository

Returns:

A human readable OWLClassExpression of the repository location

initialize

public void initialize()

Specified by:

initialize in interface OntologyRepository

refresh

public void refresh()

Description copied from interface: OntologyRepository

Ensures the repository is up to date

Specified by:

refresh in interface OntologyRepository

getEntries

public Collection<OntologyRepositoryEntry> getEntries()

Specified by:

getEntries in interface OntologyRepository

getMetaDataKeys

public List<Object> getMetaDataKeys()

Specified by:

getMetaDataKeys in interface OntologyRepository

download

public void download(File dir)

Download the ontologies and save them in the given directory.

Parameters:

dir - the directory

getOntology

public org.semanticweb.owlapi.model.OWLOntology getOntology(OntologyRepositoryEntry entry)

Returns the ontology for the entry.

Specified by:

getOntology in interface OntologyRepository

Parameters:

entry - the entry

Returns:

the OWL ontology

main

public static void main(String[] args)
                 throws Exception

Throws:

Exception